barSeed - Barley Seed Development Database

Probe ABC07662

Source Contig ABC07662

barSeed

Links

Affymetrix Source Sequence (609 bp)

>ABC07662 609
TCCCTCAAATACCTCACTACCACCTAGTAGAAGCGACCAAGGCAGCAAGGCCAGTGCTGG
GAAGATATTACCGCGAGCCAGAGAAGTCGGGTCCACTGCCACTTCACCTCTTCCATGTCC
TCCTCAGGAGCTTGAGAGCCGATCACTTCGTAAGTGATGTTGGAGATGTTGTCTTCTACC
AAACGGACCCAAGCTTGAATGGTGATAACTGGACGAAAAATGGCAAGCACAAGTGATGTA
AGATAGAGAGATATCATAGCCTGCTGGAAAATTAAGCAGAAAGGGCTTCCTGCTAAAATC
AAAGCATGTGGCTCTGCAACAACAGACAGGATGTGTTGATTGGTTGATGAGATTCAGATC
GTTCATTAGAATTAGCATTCTCCAATTGCGGTTGTAGCTAGCAATGTTATTTTCAATCTC
TTGCCAGTTTTGGATGTGGAGTTATGTAACGAATTAATGAAGCTTCGTAGACTATTGATC
AGTCTGGAGTTTGTATGTGCCGGGCCTGGGAGAGCGGGCATTAATTTTGTGAGCCGGATT
AAGTGCTCTGCACCGCTTTTCTGATCTGTTATATGCTTGCTAATTAGAGAGTAAAAAAAA
AAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_34565.6	4086	0.0	2799 - 3391	100	593 / 593	CUST_24228_PI390587928 CUST_6811_PI390587928 CUST_18798_PI390587928	ABC06725 ABC07662 ABC07663 ABC11306 ABC16504
MLOC_34566.1	1040	0.0	1 - 505	100	505 / 505	None	ABC07662 ABC07663
AK374628	1361	0.0	882 - 1359	100	478 / 478	None	ABC06725 ABC07662 ABC07663
MLOC_34565.4	3078	3e-87	2539 - 2713	100	175 / 175	CUST_6811_PI390587928	ABC07662 ABC07663 ABC11306 ABC16504
AK357949	1626	7e-59	1071 - 1308	84	200 / 238	CUST_18797_PI390587928	ABC06725 ABC07662 ABC07663