- Probe ABC11306
- Source Contig ABC11306
Affymetrix Source Sequence (1856 bp)
>ABC11306 1856 TGTTGAGCGCGGGTCGTGGATCTTCTTCCAAGGGTACAAGTTCTGTGAGCTGGAAACATG CAGTGGATGCAGAGAAGTCTACCCACCTGACACCCAATAAGGTTGATGATTTGAATATGG AGCCCCCACAGCCCTTTGCACAACCTTACAGCTCCAGGAGTTCCACAAATATGGGGCAAA CATCACCTAGTGCTTTGCATTCACCAGCTTCAGGAGGCGTGTCTGCCTTTGGCCAATGGA GGCAAAAGCCCTCACAGCTTGCAGCACAAGGTTCTGATTTGAGCGACTACAAGCTACTCG TGGAACGCCTGTTCAAGGTAGTTGGAAGGCAGGAGGAAGCCCTGAGTGCTATCTGTGGAT CCATTGTTGGCTGCCAGTCAACAGAGAGGCGCCGCGGCGCAAGCAGGAAGAACGACATCT GGTTCAGCTTTCATGGTTTCGACAGCGTGGCCAAGCGGAGAGTTGCCGTGGCGCTGGCAG AGCTCGTGCACGGCAGCCAAGACAGCTTCATTCATCTGGACCTGAGCCTCCAGGACTGGG GCGGCTCAAGTTTCAGAGGAAAGACTGGCATAGATTGCATCGTCGAGGAGTTGAGCAAGA AACGGCGCTGTGTCATCTTCCTCGACAACATTGATAAAGCTGACTGCCTCGTTCAGGACA GCCTCTCCCATGCCGTTGACACCGGAAGATTCCGGGACATGCGCGGCAAGGAAGTTGCCA TTAATGACTCCATAGTAATACTGTCAACAAGATTGGCGCGATGCAGCAAAAATGCCTCGG TTGGGGTGGAAGAGGGGCATATCTTCTCCGAAGAGAAGATCCTGGCTGCTAGAGGACAAC AACTCAAGATCTTGATAGAATCAGGCACGGTGATCACCAGCAGAGGCTCTCCTAGTAGCA GCAAGGTGGCAGCTTCCCCAAGTCACCCTCTCACCAAAATTCAAACTTCCGTGTACTCTG GTTGCGTCAGTAAGCGGAAGCTTGACATTTCTGACGACCGTGAAAAGCTGCTAGAATCAC CGAGCAATCCCAAGCGGCCGCACAGAACCTCAAGTGTGCCGTTCGACCTGAACCTCCCCG TCGGCGAGGACGGATCCAGTGACGCTGACGGCGACGACAGCAGCAGCAACGACAGTCCAG ATGAGTCCATCGACAGCCTCCTGGGTTTGGTCGACAGAGCGATCGAATTCAAGGCGTTCG ACTTTGGGAAACTCGCCAACGACATCCTGCAGGAGCTGAGCAACGTGCTCGGCAACATCA TGGGCCCGGGCAGCACGCTGGAGGTCGGCGATGGCGCGATGGAGCAAATGCTTGCGGCGT CATGGGCATCGGAGGACAGGCGGCGCCCTCTGCAGGCCTGGCTGGAGCAGGTGTTCGCCA GGAGCCTCGAGGAGCTGAAGCTCAAGCACAGTAAGCCTGCGGGCAACTCTGCTCTTAGGC TAGTGGCCTGTGACTGTGAGGACGGCAAAGCAGCAGCGACGGCGGCGAAGGAAGACGGCG GTTTTGGACCGCTGCTCCCCTCGAGAATAATTCTGGAGTGGCGATGAATGGATGACAATA TCTGTATATACTGTGATGGATCGCGTCATTGTTGGTAGCTAGTCCACGGTAGTATAGCGT TATAAGCCTGGTTGCGAACTAAATAAGTTGTAGTCTACACTAGTTGATTGCTGGTAGGCT ACACTAGTTGATGATGCACTGCCTTCTTCGATCAATATATATTGGCAAGTGTATAGATTT TGACTGTAACTATTGTTGATTTCTTTGCCAATATATGATGATCGTACATGTGGTGCTGCA AATATATGGTATTAGACTTAGGGTTTTGGGAAAAAAAAAAAAAAAAAAGAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_10219.1 | 3721 | 0.0 | 54 - 1885 | 99 | 1829 / 1832 | CUST_30949_PI390587928 CUST_13128_PI390587928 | ABC11306 |
| MLOC_10219.2 | 3737 | 0.0 | 54 - 1885 | 99 | 1829 / 1832 | CUST_30949_PI390587928 CUST_13128_PI390587928 | ABC11306 |
| MLOC_10219.3 | 3726 | 0.0 | 54 - 1885 | 99 | 1829 / 1832 | CUST_30949_PI390587928 CUST_13128_PI390587928 | ABC11306 |
| AK372211 | 3891 | 0.0 | 2122 - 3891 | 99 | 1764 / 1772 | CUST_28299_PI390587928 CUST_13128_PI390587928 | ABC11306 |
| MLOC_34565.6 | 4086 | 0.0 | 788 - 2218 | 78 | 1131 / 1458 | CUST_6811_PI390587928 CUST_18798_PI390587928 CUST_24228_PI390587928 | ABC06725 ABC07662 ABC07663 ABC11306 ABC16504 |
| MLOC_34565.1 | 3041 | 0.0 | 1402 - 2832 | 78 | 1131 / 1458 | CUST_6811_PI390587928 | ABC11306 ABC16504 |
| MLOC_34565.5 | 2852 | 0.0 | 1161 - 2591 | 78 | 1131 / 1458 | CUST_6811_PI390587928 CUST_24228_PI390587928 | ABC11306 ABC16504 |
| MLOC_34565.2 | 3147 | 0.0 | 1372 - 2802 | 78 | 1131 / 1458 | CUST_6811_PI390587928 CUST_24228_PI390587928 | ABC11306 ABC16504 |
| MLOC_34565.3 | 3181 | 0.0 | 1359 - 2789 | 78 | 1131 / 1458 | CUST_6811_PI390587928 CUST_24228_PI390587928 | ABC11306 ABC16504 |
| MLOC_34565.4 | 3078 | 0.0 | 1152 - 2535 | 78 | 1098 / 1411 | CUST_6811_PI390587928 | ABC07662 ABC07663 ABC11306 ABC16504 |