- Probe ABC02683
- Source Contig ABC02683
Affymetrix Source Sequence (1384 bp)
>ABC02683 1384 AGCTGCAGCAGCTACTACTCCCGCCTGCTTCCTTGCTTGCTTGCTTTGCTTCCCCGTCGA GGAGGAGGAAGAAGAGGATGGGGGGCGTGGGCGTCTCCCTCGCGCTGCTCGCCGCCGCCG CCGCCGTCGTCATCTCCGCCGTCGCTGCCGCCCCGCAGCTGGTCGGAGCAGCCAAGGCAG AGCATTCCCTAGGAATCATCCAGGAAGACATCATTCAGACGGTCAACGACCATCCCAATG CCGGGTGGACGGCTGGACACAACCCCTACTTTGCAAACTACACTATTGAGCAATTCAAGC ATATCCTGGGAGTGAAGCCAACGCCTCCGGGCTTGCTCGCTGGCGTCCCAATCAAAACCC ATCCAAAATCAGCAGATCTCCCGAAGGAGTTTGACGCTAGAACTCAATGGTCTAGTTGCA GCACAATCGGGAACATACTTGATCAAGGTCACTGTGGTGCCTGTTGGGCCTTTGCTGCCG TGGAATCTCTCCAGGATCGTTTCTGCATTCATCTCAACATGAGCGTCTCACTTTCGGTCA ATGACCTACTGGCTTGCTGTGGTTTTCTGTGTGGTAGCGGTTGTAATGGAGGATATCCTA TCAGCGCATGGCGCTACTTCCGTCGCAGTGGTGTCGTCACTGAGGAGTGTGATCCATACT TCGATCAGACTGGTTGCCAGCATCCTGGATGCGAGCCAGCTTATCCTACACCAAAATGTC ACAGGAAATGCAAGGTGGAGAACCAAGTGTGGAAGAAAAATAAGCATTTCAGTGTTAACG CGTACAGAGTACATTCTAATCCCCATGACATCATGGCAGAGGTCTACAAAAATGGCCCTG TAGAAGTTGCTTTCACCGTTTATGAGGACTTTGCACACTACAAGTCAGGAGTATACAAGC ACATCACCGGTGGCGTGATGGGAGGTCACGCTGTCAAGTTGATTGGTTGGGGAACCAGTG ATGCCGGCGAGGATTACTGGCTTCTTGCAAACCAGTGGAACAGAGGATGGGGTGATGACG GATACTTCAAGATCATAAGGGGCAAGAATGAATGTGGCATCGAAGAAGATGTTACTGCCG GCATGCCCTCGACAAAGAACATGGACAGAAACAACGATGTCGCCTTTGGAACCGCCATAC TTTGAGCAGCGCCTTGGTCACAAACGCAGTTGAAATTAGCTGTTTGAATGTAAAATGAAG CCCATAAATTAGCTGTTTGAATGTAAAATGAAGCCCATAAATTATCTGTTTGAATGTAAA ATGAAGCCCGTAAAATAGATTTGATGGCTCCAGGATTCTGTACTCTGTACACTAGCGCAA GCGCTGATATGTTGTTGAAACAACACTTGTTCAGAAACAAAAGAGAATAATGATAGTATC AATA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_63916.1 | 4036 | 0.0 | 143 - 1520 | 99 | 1370 / 1384 | CUST_20542_PI390587928 CUST_20544_PI390587928 CUST_20546_PI390587928 | ABC02680 ABC02681 ABC02683 |
| AK368127 | 1377 | 2e-52 | 1259 - 1377 | 98 | 117 / 119 | None | ABC02680 ABC02681 ABC02683 |
| AK362724 | 1471 | 2e-102 | 1231 - 1442 | 99 | 209 / 212 | CUST_20546_PI390587928 CUST_20544_PI390587928 CUST_20542_PI390587928 | ABC02680 ABC02681 ABC02683 |
| MLOC_63916.3 | 1543 | 0.0 | 125 - 568 | 97 | 438 / 451 | None | ABC02680 ABC02681 ABC02683 |
| MLOC_63916.4 | 1445 | 0.0 | 100 - 543 | 97 | 438 / 451 | None | ABC02680 ABC02681 ABC02683 |
| AK364590 | 3202 | 0.0 | 1192 - 2189 | 86 | 867 / 1004 | CUST_9940_PI390587928 | ABC02680 ABC02681 ABC02683 ABC03319 ABC22151 ABC38726 |
| AK359558 | 1348 | 0.0 | 169 - 1166 | 86 | 867 / 1004 | None | ABC02680 ABC02681 ABC02683 ABC22151 |
| AK368614 | 1477 | 0.0 | 266 - 1266 | 85 | 850 / 1004 | CUST_20545_PI390587928 CUST_24180_PI390587928 | ABC02680 ABC02681 ABC02683 |
| AK358907 | 1478 | 0.0 | 137 - 1137 | 85 | 850 / 1004 | CUST_24180_PI390587928 CUST_20545_PI390587928 CUST_7284_PI390587928 | ABC02680 ABC02681 ABC02683 |
| MLOC_63916.2 | 1539 | 0.0 | 128 - 571 | 97 | 438 / 451 | None | ABC02680 ABC02681 ABC02683 |
| MLOC_75653.1 | 1527 | 0.0 | 702 - 1357 | 88 | 578 / 658 | None | ABC02680 ABC02681 ABC02683 ABC22151 |
| MLOC_63917.1 | 4539 | 3e-51 | 609 - 732 | 97 | 120 / 124 | CUST_20544_PI390587928 CUST_20542_PI390587928 CUST_20546_PI390587928 | ABC02683 |
| MLOC_63916.5 | 1346 | 3e-51 | 611 - 734 | 97 | 120 / 124 | CUST_20546_PI390587928 CUST_20542_PI390587928 CUST_20544_PI390587928 | ABC02683 |
| MLOC_15279.1 | 1158 | 3e-75 | 260 - 605 | 82 | 285 / 347 | CUST_24180_PI390587928 CUST_20545_PI390587928 | ABC02680 ABC02681 ABC02683 |
| MLOC_15279.2 | 1204 | 1e-94 | 824 - 1204 | 83 | 319 / 383 | CUST_24180_PI390587928 | ABC02680 ABC02681 ABC02683 |
| MLOC_15279.3 | 1157 | 3e-75 | 238 - 583 | 82 | 285 / 347 | CUST_24180_PI390587928 | ABC02680 ABC02681 ABC02683 |