barSeed - Barley Seed Development Database

Probe ABC22151

Source Contig ABC22151

barSeed

Links

Affymetrix Source Sequence (601 bp)

>ABC22151 601
GATCAGTAGCAGCTACCTCCTCCGCTTGCTTCCTCCTCCCTCCCACCGTGCGTCGCCGAT
CGAGGACGAAGATGGGGAGCGGCCTGCTCCCGCTGGCGCTGCTCGTCGTCCTCTCCGCCG
CCGCCGCCGCCCCCCAGGTCCGGCCCTTCTCCTCCGGCCGAGTCGAGATCCCGTCGCCGC
CGCGCTCTTGCTGGCTGCTGCTTTCATCAGAAGTCAAACCAGAATAACGCTCGCATATCC
GAATTTACTGTACTGTATGTGTGGTAGCACTATTAGGAGCTTCCGTTATTATTCTTACTA
GAAAAAAAAATCCCAATTTGGTAAGTTGCGTAGATATTATCATTAGTAGCACTGTAATTC
TGCGAATCCCGGAAGTGCTGTACCTAGTGCTGCGACCCGTTCTCCGCGAAGCGCGAATCC
ACCCCGGACGAAGGGGCTGCGACAGAGCCGTGCTGGAGCTCGATGGCGGGCCGACGTCGG
AGGGGCCTCTTCCTCTGATACTAAGCTTGATGCCAACACTGAAAAACGAACAGCTCTGAA
CCAAAGTTCGATCCTTTTCTTTCTATGGGGGGCAAAGAATCAACAGCGATGCTACGCAGT
T

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_75653.2	3439	6e-99	430 - 625	100	196 / 196	None	ABC02680 ABC02681 ABC22151
AK364590	3202	1e-65	2136 - 2271	100	136 / 136	CUST_9940_PI390587928	ABC02680 ABC02681 ABC02683 ABC03319 ABC22151 ABC38726
AK359558	1348	1e-65	87 - 222	100	136 / 136	None	ABC02680 ABC02681 ABC02683 ABC22151
MLOC_75653.1	1527	3e-62	56 - 191	99	134 / 136	None	ABC02680 ABC02681 ABC02683 ABC22151