- Probe ABC02680
- Source Contig ABC02680
Affymetrix Source Sequence (1315 bp)
>ABC02680 1315 ATCAGTAGCAGCTACCTCCTCCGCTTGCTTCCTCCTCCCTCCCACCGTGCGTCGCCGATC GAGGACGAAGATGGGGAGCGGCCTGCTCCCGCTGGCGCTGCTCGTCGTCCTCTCCGCCGC CGCCGCCGCCCCCCAGCTCGCCGGAGCGGCAGGGGGAGGCCATTCCCTAGGAATCATCCA GAAAGGCATCATACAGACGGTCAACAACCATCCCAACGCCGGATGGACGGCTGGACACAA CCCCTACCTCGCCAATTACACTATTGAGCAATTTAAGCATATGCTGGGAGTGAAACCAAC ACCTCCAGGTTTACTGGCTGGTGTTCGAACCAAAACTCATCCAAGGTCAGAGCAGCTCCC AAAGGAGTTCGACGCCAGGTCGAAATGGTCCGGTTGCAGCACAATTGGGAAAATACTTGA TCAAGGTCACTGCGGTTCCTGTTGGGCTTTTGGAGCTGTGGAGTGTCTGCAAGATCGTTT CTGCATCCATCACAACATGAACATTTCACTTTCTGCCAATGACCTAGTGGCTTGCTGTGG GTTTATGTGTGGTGATGGTTGTGATGGAGGATATCCTATCAGCGCATGGCAATACTTCGT CCAGAATGGTGTTGTTACTGAGGAGTGCGATCCATACTTTGATCAGGTTGGCTGCAAGCA TCCTGGATGCGAACCTGCTTATCCTACACCTGTGTGTGAAAAGAAATGCAAGGTGCAGAA CCAAGTTTGGCAGGAAAAGAAACATTTCAGCATCGATGCATACCAAGTAAACTCTGATCC ACATGACATCATGGCAGAGGTCTACAAGAATGGCCCTGTAGAAGTTGCTTTCACAGTTTA TGAGGACTTCGCACACTACAAGTCAGGAGTGTACAAGCACATCACAGGTGGCGTCATGGG AGGTCATGCCGTCAAGTTGATTGGTTGGGGAACCAGTGATGCTGGCGAGGATTACTGGCT TCTTGCAAATCAGTGGAACAGAGGCTGGGGTGATGACGGATACTTCAAGATCATAAGGGG CAAGAATGAATGTGGCATCGAAGAAGATGTTACAGCCGGTATGCCCTCGATGAAGAACAT CGCCGGTAGCGCCTTTGCAATGTGAAGTTTGAGCAGCGCCTCGTCCTCTGATGCAGCTGG AATTAGCTATTTGCCTGTCAAATTAAGCGGGCAAACTAGCATTGATGGTTCCAGGACTAT GTATTCTGTGCACTAGCTATGGATGTGCCCGTTAATAACAATGAAGCAGTTTTTTTTTGT TGAAAAAAAAAAAAAAAAAGTTATTATTAAAGGATATGTGAATGAAAAATAATTA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK364590 | 3202 | 0.0 | 991 - 2271 | 99 | 1279 / 1281 | CUST_9940_PI390587928 | ABC02680 ABC02681 ABC02683 ABC03319 ABC22151 ABC38726 |
| AK359558 | 1348 | 0.0 | 87 - 1348 | 100 | 1262 / 1262 | None | ABC02680 ABC02681 ABC02683 ABC22151 |
| MLOC_75653.1 | 1527 | 0.0 | 56 - 483 | 99 | 424 / 429 | None | ABC02680 ABC02681 ABC02683 ABC22151 |
| AK368614 | 1477 | 0.0 | 234 - 1352 | 90 | 1008 / 1123 | CUST_24180_PI390587928 CUST_20545_PI390587928 | ABC02680 ABC02681 ABC02683 |
| AK358907 | 1478 | 0.0 | 105 - 1223 | 90 | 1008 / 1123 | CUST_7284_PI390587928 CUST_24180_PI390587928 CUST_20545_PI390587928 | ABC02680 ABC02681 ABC02683 |
| AK362724 | 1471 | 0.0 | 97 - 1094 | 86 | 867 / 1004 | CUST_20546_PI390587928 CUST_20544_PI390587928 CUST_20542_PI390587928 | ABC02680 ABC02681 ABC02683 |
| AK368127 | 1377 | 0.0 | 125 - 1122 | 86 | 867 / 1004 | None | ABC02680 ABC02681 ABC02683 |
| MLOC_63916.1 | 4036 | 0.0 | 255 - 1238 | 86 | 853 / 990 | CUST_20546_PI390587928 CUST_20544_PI390587928 CUST_20542_PI390587928 | ABC02680 ABC02681 ABC02683 |
| MLOC_63916.3 | 1543 | 0.0 | 704 - 1365 | 88 | 582 / 664 | None | ABC02680 ABC02681 ABC02683 |
| MLOC_63916.4 | 1445 | 0.0 | 795 - 1440 | 88 | 568 / 648 | None | ABC02680 ABC02681 ABC02683 |
| MLOC_15279.1 | 1158 | 1e-108 | 228 - 605 | 86 | 328 / 381 | CUST_20545_PI390587928 CUST_24180_PI390587928 | ABC02680 ABC02681 ABC02683 |
| MLOC_63916.2 | 1539 | 3e-160 | 823 - 1364 | 86 | 466 / 544 | None | ABC02680 ABC02681 ABC02683 |
| MLOC_15279.2 | 1204 | 1e-154 | 824 - 1204 | 93 | 353 / 381 | CUST_24180_PI390587928 | ABC02680 ABC02681 ABC02683 |
| MLOC_75653.2 | 3439 | 1e-54 | 2709 - 2832 | 98 | 122 / 124 | None | ABC02680 ABC02681 ABC22151 |
| MLOC_15279.3 | 1157 | 1e-108 | 206 - 583 | 86 | 328 / 381 | CUST_24180_PI390587928 | ABC02680 ABC02681 ABC02683 |
| MLOC_69199.1 | 544 | 5e-108 | 214 - 537 | 89 | 288 / 325 | None | ABC02680 ABC02681 |