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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24180_PI390587928Hv_44K_v2ACCATTCCCTGCCAATCATCCAGGAAGACATCATGCGGACGGGCAACAGCCATCCCAATG127GeneList: skyblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.3360.8152.2701.5950.9730.989
Raw 60.377213.769558.991561.716129.679144.735



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36861414773e-21339 - 3989758 / 60plus ABC02680 ABC02681 ABC02683
MLOCAK35890714783e-21210 - 2699758 / 60plus ABC02680 ABC02681 ABC02683
MLOCMLOC_15279.311573e-21317 - 3769758 / 60plus ABC02680 ABC02681 ABC02683
MLOCMLOC_15279.212043e-21338 - 3979758 / 60plus ABC02680 ABC02681 ABC02683
MLOCMLOC_15279.111583e-21339 - 3989758 / 60plus ABC02680 ABC02681 ABC02683
JLOC1JLOC1_10475.111712e-21348 - 4079758 / 60plus
Harvest21ABC428072893e-25128 - 18710060 / 60plus
Harvest35U35_447232893e-25128 - 18710060 / 60plus



Contig Sequence (289 bp)

>U35_44723 289 Hv_44K_v2
TTGCAGCCACTCCCCTGTCGCCGGTCGAGAAAGGAGATGGGCGGCCTACTCCCGCTGGCG
CTGCTCGTCGNCCTCTCTGCCGCTGCCGCTGCCGCTGCCCCTCANCTNGTCGGAGCTGCN
AGGGGCGACCATTCCCTGCCAATCATCCAGGAAGACATCATGCGGACGGGCAACAGCCAT
CCCAATGCCGGGTGGACGGCTGGACACAACCCATACCTCNCAAACTATACTATTGACCAA
TNTAAGCATATCCTGAGAANGAAGCCAACACCTNCGGGGTTACTGGCTG



Homology of Contig U35_44723 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None