- Probe ABC01736
- Source Contig ABC01736
Affymetrix Source Sequence (2843 bp)
>ABC01736 2843 GCAACACACATCCATCTTCACTGAAAAGTGAAAAACAGTGTGCTGGTGCCATTGGTTGGA GCAGTGAAAGCGAGGAGAGGAGGCCAAGAACAAGATGCTGCTGGGAGGGCTGATCGACAC CCTCACGGGGGCGAACAAGAGCGCCCGGCTCAAGGGCACGGTGGTGCTCATGCGCAAGAA CGTGCTGGACCTCAACGACTTCGGCGCCACCATCATCGACGGCATCGGCGAGTTCCTCGG CAAGGGCGTCACCTGCCAGCTTATCAGCTCCACCGCCGTCGACCAAGACAACGGCGGTCG CGGGAAGGTGGGCGCGGAGGCGGAGCTGGAGCAGTGGGTGACGAGCCTGCCGTCGCTGAC GACGGGGGAGTCCAAGTTCGGCCTCACCTTCGACTGGGAGGTGGAGAAGCTCGGGGTGCC GGGCGCCATCGTCGTCAACAACTACCACAGCTCCGAGTTCCTGCTTAAAACCATCACCCT CCACGACGTCCCCGGCCGCAGCGGCAACCTCACCTTCGTCGCCAACTCATGGATCTACCC CGCCGCCAACTACCGATACAGCCGCGTCTTCTTCGCCAACGACACGTACCTGCCGAGCCA GATGCCGGCGGCGCTGAAGCCGTACCGCGACGACGAGCTCCGGAACCTGCGTGGCGACGA CCAGCAGGGCCCGTACCAGGAGCACGACCGCATCTACCGCTACGACGTCTACAACGACCT CGGCGAGGGCCGCCCCATCCTCGGCGGCAACTCCGACCACCCTTACCCGCGCCGCGGCCG CACGGAGCGCAAGCCCAACGCCAGCGACCCGAGCCTGGAGAGCCGGCTGTCGCTGCTGGA GCAGATCTACGTGCCGCGGGACGAGAAGTTCGGCCACCTCAAGACGTCCGACTTCCTGGG CTACTCCATCAAGGCCATCACGCAGGGCATCCTGCCGGCCGTGCGCACCTACGTGGACAC CACCCCCGGCGAGTTCGACTCCTTCCAGGACATCATCAACCTCTATGAGGGCGGCATCAA GCTGCCCAAGGTGGCCGCCCTGGAGGAGCTCCGTAAGCAGTTCCCGCTCCAGCTCATCAA GGACCTCCTCCCCGTCGGCGGCGACTCCCTGCTTAAGCTCCCCGTGCCCCACATCATCCA GGAGAACAAGCAGGCGTGGAGGACCGACGAGGAGTTCGCACGGGAGGTGCTCGCCGGCGT CAACCCGGTCATGATCACGCGTCTCACGGAGTTCCCGCCAAAAAGTAGTCTGGACCCTAG CAAGTTTGGTGACCACACCAGCACCATCACGGCGGAGCACATAGAGAAGAACCTCGAGGG CCTCACGGTGCAGCAGGCGCTGGAAAGCAACAGGCTGTACATCCTTGATCACCATGACCG GTTCATGCCGTTCCTGATCGACGTCAACAACCTGCCCGGCAACTTCATCTACGCCACGAG GACCCTCTTCTTCCTGCGCGGCGACGGCAGGCTCACGCCGCTCGCCATCGAGCTGAGCGA GCCCATCATCCAGGGCGGCCTTACCACGGCCAAGAGCAAGGTTTACACGCCGGTGCCCAG CGGCTCCGTCGAAGGCTGGGTGTGGGAGCTCGCCAAGGCCTACGTCGCCGTCAATGACTC CGGGTGGCACCAGCTCGTCAGCCACTGGCTGAACACTCACGCGGTGATGGAGCCGTTCGT GATCTCGACGAACCGGCACCTTAGCGTGACGCACCCGGTGCACAAGCTGCTGAGCCCGCA CTACCGCGACACCATGACCATCAACGCGCTGGCGCGGCAGACGCTCATCAACGCCGGCGG CATCTTCGAGATGACGGTGTTCCCGGGCAAGTTCGCGTTGGGGATGTCGGCCGTGGTGTA CAAGGACTGGAAGTTCACCGAGCAGGGACTGCCGGACGATCTCATCAAGAGGGGCATGGC GGTGGAGGACCCGTCGAGCCCGTACAAGGTGCGGTTGCTGGTGTCGGACTACCCGTACGC GGCGGACGGGCTGGCGATCTGGCACGCCATTGAGCAGTACGTGAGCGAGTACCTGGCCAT CTACTACCCGAACGACGGCGTGCTGCAGGGCGATACGGAGGTGCAGGCGTGGTGGAAGGA GACGCGCGAGGTCGGGCACGGCGACCTCAAGGACGCCCCATGGTGGCCCAAGATGCAAAG TGTGCCGGAGCTGGCCAAGGCGTGCACCACCATCATCTGGATCGGGTCGGCGCTGCATGC GGCAGTCAACTTCGGGCAGTACCCCTACGCGGGGTTCCTCCCGAACCGGCCGACGGTGAG CCGGCGCCGCATGCCGGAGCCCGGCACGGAGGAGTACGCGGAGCTGGAGCGCGACCCGGA GCGGGCCTTCATCCACACCATCACGAGCCAGATCCAGACCATCATCGGCGTGTCGCTGCT GGAGGTGCTGTCGAAGCACTCCTCCGACGAGCTGTACCTCGGGCAGCGGGACACGCCGGA GTGGACCTCGGACCCAAAGGCCCTGGAGGTGTTCAAGCGGTTCAGCGACCGGCTGGTGGA GATCGAGAGCAAGGTGGTGGGCATGAACCATGACCCGGAGCTCAAGAACCGCAACGGCCC GGCTAAGTTTCCCTACATGCTGCTCTACCCCAACACCTCCGACCACAAGGGCGCCGCTGC CGGGCTTACCGCCAAGGGCATCCCCAACAGCATCTCCATCTAATCTAAGCCATCGGCAAC CATGGATGAATAAAGGGCGTTCGCCACGTACGAAACTTGTCGAGAGATTGGTGTAGTGTG TGTCTGTGACAGTACTATGTCAGCAGTTGCTCTTTAAGCCGAATAAATAAAGCAGATTTG CTTCCAAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_54031.1 | 2939 | 0.0 | 62 - 2887 | 100 | 2826 / 2826 | CUST_22255_PI390587928 CUST_35462_PI390587928 CUST_11843_PI390587928 CUST_35460_PI390587928 | ABC01734 ABC01735 ABC01736 ABC01737 ABC42329 |
| AK355935 | 3049 | 0.0 | 111 - 2663 | 82 | 2109 / 2570 | CUST_42095_PI390587928 CUST_35458_PI390587928 CUST_20831_PI390587928 CUST_35455_PI390587928 CUST_35463_PI390587928 | ABC01735 ABC01736 ABC01737 ABC34559 ABC42329 ABC48288 |
| MLOC_70664.2 | 2877 | 0.0 | 193 - 2722 | 81 | 2057 / 2545 | CUST_17622_PI390587928 CUST_23475_PI390587928 | ABC01735 ABC01736 ABC34559 ABC42329 |
| MLOC_54031.2 | 1718 | 4e-137 | 1057 - 1322 | 100 | 266 / 266 | CUST_35462_PI390587928 CUST_11843_PI390587928 | ABC01734 ABC01735 ABC01736 ABC01737 ABC42329 |
| MLOC_58726.1 | 2963 | 0.0 | 225 - 2775 | 78 | 2029 / 2593 | None | ABC01735 ABC01736 ABC01737 ABC34559 ABC42329 |
| MLOC_37378.1 | 2107 | 0.0 | 1 - 1717 | 82 | 1415 / 1729 | CUST_20831_PI390587928 CUST_35455_PI390587928 CUST_35463_PI390587928 | ABC01735 ABC01736 ABC01737 ABC34559 ABC42329 ABC48288 |
| MLOC_70664.1 | 3027 | 0.0 | 194 - 1279 | 81 | 889 / 1095 | CUST_17622_PI390587928 CUST_23475_PI390587928 | ABC01735 ABC01736 ABC34559 ABC42329 |
| MLOC_55029.5 | 2652 | 0.0 | 873 - 2415 | 79 | 1224 / 1555 | CUST_35461_PI390587928 | ABC01736 ABC01737 ABC42721 |
| MLOC_55029.1 | 3816 | 0.0 | 1960 - 3502 | 79 | 1223 / 1555 | CUST_35461_PI390587928 CUST_35459_PI390587928 | ABC01736 ABC01737 ABC42721 |
| MLOC_37378.2 | 2181 | 0.0 | 892 - 1672 | 83 | 657 / 788 | CUST_35455_PI390587928 CUST_35463_PI390587928 | ABC01735 ABC01736 ABC01737 ABC34559 ABC42329 ABC48288 |
| MLOC_65160.1 | 1342 | 0.0 | 17 - 797 | 83 | 655 / 786 | CUST_42095_PI390587928 CUST_35458_PI390587928 | ABC01735 ABC01736 |
| MLOC_70664.3 | 3672 | 1e-51 | 779 - 989 | 84 | 178 / 211 | CUST_17622_PI390587928 CUST_23475_PI390587928 | ABC01735 ABC01736 ABC34559 ABC42329 |
| MLOC_55029.3 | 6580 | 2e-65 | 5119 - 5384 | 84 | 224 / 267 | CUST_35461_PI390587928 | ABC01736 ABC01737 ABC42721 |
| MLOC_55029.4 | 3084 | 2e-135 | 1663 - 2576 | 77 | 707 / 923 | CUST_35461_PI390587928 CUST_35459_PI390587928 | ABC01736 ABC01737 ABC42721 |
| MLOC_55029.2 | 2807 | 1e-107 | 1992 - 2807 | 76 | 624 / 824 | CUST_35459_PI390587928 | ABC01736 ABC01737 |