barSeed - Barley Seed Development Database

Probe ABC42329

Source Contig ABC42329

barSeed

Links

Affymetrix Source Sequence (536 bp)

>ABC42329 536
GCAGCTCGCCAAGGCGTACGTCTGCGTGAACGACTACGGCTATCACCAGCTGGTCAGCCA
CTGGCTCAACACGCACGCCGTGATGGAGCCTTTCATCATTGGCATTTCTCTGCTGGAGAT
CCTATCCAAGCACTCCTCCGACGAGATTTACCTCGGGCAGCGTGACACGCCGGAGTGGAC
GTCGGATGCCAAGGCGCTGGAGGCGTTCAAGCGGTTCGGCACGAGGCTGGAGGGCATCGA
GAGCGAGGTGGTCGCCTTGAACGGAAACCCCCAGCTCAAGAACCGCAATGGACCGGTCCA
CTTTCCATACATGCTGCTCTACCCCAACACCTCCGACCACACGGGCAAGGCTGAGGGGCT
CACTGCCAGGGGCATCCCCAACAGCATCTCTATATGATGAGATGTGTGGAGGACGGCCAC
AACTGTAACATGCGAAAATGTTGAGTGGTTGGCCAAGGGTTAATGTATTTTCCTTTTAAA
TTTTCCGTTCCAATTTATATATTAATAAAGTGAGTTTTGTAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_70664.3	3672	0.0	3156 - 3583	100	428 / 428	CUST_17622_PI390587928 CUST_23475_PI390587928	ABC01735 ABC01736 ABC34559 ABC42329
MLOC_70664.1	3027	0.0	2521 - 2948	100	428 / 428	CUST_17622_PI390587928 CUST_23475_PI390587928	ABC01735 ABC01736 ABC34559 ABC42329
MLOC_70664.2	2877	0.0	2426 - 2853	100	428 / 428	CUST_23475_PI390587928 CUST_17622_PI390587928	ABC01735 ABC01736 ABC34559 ABC42329
AK355935	3049	3e-87	2360 - 2657	86	258 / 299	CUST_35458_PI390587928 CUST_20831_PI390587928 CUST_42095_PI390587928 CUST_35463_PI390587928 CUST_35455_PI390587928	ABC01735 ABC01736 ABC01737 ABC34559 ABC42329 ABC48288
MLOC_37378.2	2181	3e-87	1369 - 1666	86	258 / 299	CUST_35455_PI390587928 CUST_35463_PI390587928	ABC01735 ABC01736 ABC01737 ABC34559 ABC42329 ABC48288
MLOC_37378.1	2107	3e-87	1414 - 1711	86	258 / 299	CUST_35455_PI390587928 CUST_35463_PI390587928 CUST_20831_PI390587928	ABC01735 ABC01736 ABC01737 ABC34559 ABC42329 ABC48288
MLOC_58726.1	2963	9e-72	2477 - 2773	83	249 / 299	None	ABC01735 ABC01736 ABC01737 ABC34559 ABC42329
MLOC_54031.2	1718	9e-72	210 - 506	83	248 / 298	CUST_35462_PI390587928 CUST_11843_PI390587928	ABC01734 ABC01735 ABC01736 ABC01737 ABC42329
MLOC_54031.1	2939	9e-72	212 - 508	83	248 / 298	CUST_22255_PI390587928 CUST_35462_PI390587928 CUST_35460_PI390587928 CUST_11843_PI390587928	ABC01734 ABC01735 ABC01736 ABC01737 ABC42329