Probe CUST_507_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_507_PI426222305 | JHI_St_60k_v1 | DMT400024175 | GCAATACAATTGTTTTGTTGTACCATACACTCCAGCAGAGTTTTGGAGTATTATTTGACT |
All Microarray Probes Designed to Gene DMG401009344
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_276_PI426222305 | JHI_St_60k_v1 | DMT400024176 | GCAATACAATTGTTTTGTTGTACCATACACTCCAGCAGAGTTTTGGAGTATTATTTGACT |
| CUST_284_PI426222305 | JHI_St_60k_v1 | DMT400024174 | ATGATGCGCATTCTATATGCTTTATGCATTCACTGCCCCTTCTGTCCTCTGTTCGTCTGT |
| CUST_507_PI426222305 | JHI_St_60k_v1 | DMT400024175 | GCAATACAATTGTTTTGTTGTACCATACACTCCAGCAGAGTTTTGGAGTATTATTTGACT |
| CUST_405_PI426222305 | JHI_St_60k_v1 | DMT400024173 | AGTTATAGGCTTGACCAATAATGGCATCTCAGTTCGCCGAATCATCTATTTTGTGCCGTG |
Microarray Signals from CUST_507_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 45.7134 | 9.63254 | 0.756252 | 0.187092 |
| ABA 1h | 50.1187 | 12.4005 | 0.932805 | 0.185501 |
| ACC 1h | 56.8165 | 16.1177 | 0.867195 | 0.247233 |
| BABA 1h | 64.3986 | 6.30747 | 1.1536 | 0.0897373 |
| Chitin 1h | 56.2529 | 4.54579 | 1.08647 | 0.162507 |
| Epi 1h | 55.5578 | 6.86792 | 1.10176 | 0.135912 |
| SA 1h | 66.8097 | 4.97245 | 1.12884 | 0.0840576 |
| Me-JA 1h | 120.657 | 9.00481 | 2.56332 | 0.299039 |
| Control 6h | 52.9538 | 9.12684 | 0.890653 | 0.0852169 |
| ABA 6h | 86.334 | 12.3283 | 1.38736 | 0.126566 |
| ACC 6h | 63.6847 | 11.2017 | 0.937254 | 0.124545 |
| BABA 6h | 51.618 | 4.77605 | 0.803776 | 0.074166 |
| Chitin 6h | 37.5777 | 6.63162 | 0.597951 | 0.0900394 |
| Epi 6h | 52.84 | 11.9084 | 0.778787 | 0.201157 |
| SA 6h | 42.5022 | 6.70095 | 0.731632 | 0.140928 |
| Me-JA 6h | 72.8783 | 16.0591 | 1.20512 | 0.232104 |
Source Transcript PGSC0003DMT400024175 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc04g076300.2 | +3 | 0.0 | 1239 | 669/712 (94%) | genomic_reference:SL2.50ch04 gene_region:58808337-58816333 transcript_region:SL2.50ch04:58808337..58816333- go_terms:GO:0005216 functional_description:Transporter small conductance mechanosensitive ion channel (MscS) family (AHRD V1 *-** A7ZLG1_ECO24); contains Interpro domain(s) IPR006685 Mechanosensitive ion channel MscS |
| TAIR PP10 | AT1G58200.1 | +3 | 0.0 | 649 | 373/668 (56%) | MSCS-like 3 | chr1:21548370-21552488 REVERSE LENGTH=678 |