Probe CUST_276_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_276_PI426222305 | JHI_St_60k_v1 | DMT400024176 | GCAATACAATTGTTTTGTTGTACCATACACTCCAGCAGAGTTTTGGAGTATTATTTGACT |
All Microarray Probes Designed to Gene DMG401009344
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_276_PI426222305 | JHI_St_60k_v1 | DMT400024176 | GCAATACAATTGTTTTGTTGTACCATACACTCCAGCAGAGTTTTGGAGTATTATTTGACT |
| CUST_284_PI426222305 | JHI_St_60k_v1 | DMT400024174 | ATGATGCGCATTCTATATGCTTTATGCATTCACTGCCCCTTCTGTCCTCTGTTCGTCTGT |
| CUST_507_PI426222305 | JHI_St_60k_v1 | DMT400024175 | GCAATACAATTGTTTTGTTGTACCATACACTCCAGCAGAGTTTTGGAGTATTATTTGACT |
| CUST_405_PI426222305 | JHI_St_60k_v1 | DMT400024173 | AGTTATAGGCTTGACCAATAATGGCATCTCAGTTCGCCGAATCATCTATTTTGTGCCGTG |
Microarray Signals from CUST_276_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 51.2594 | 4.47453 | 0.904795 | 0.0794296 |
| ABA 1h | 51.6299 | 13.992 | 0.967832 | 0.204415 |
| ACC 1h | 64.2805 | 14.4586 | 1.04617 | 0.195054 |
| BABA 1h | 73.048 | 16.4007 | 1.26215 | 0.204821 |
| Chitin 1h | 56.1312 | 4.75192 | 1.10082 | 0.0927 |
| Epi 1h | 50.4763 | 11.5227 | 0.984917 | 0.226825 |
| SA 1h | 81.1459 | 9.68302 | 1.38312 | 0.103324 |
| Me-JA 1h | 102.47 | 8.69262 | 2.2113 | 0.148423 |
| Control 6h | 54.8402 | 15.583 | 0.879478 | 0.215488 |
| ABA 6h | 87.9568 | 20.6695 | 1.39174 | 0.247185 |
| ACC 6h | 47.7435 | 11.0695 | 0.701314 | 0.0761425 |
| BABA 6h | 52.5961 | 6.06575 | 0.822758 | 0.111175 |
| Chitin 6h | 45.5609 | 6.20666 | 0.744293 | 0.0943808 |
| Epi 6h | 48.0215 | 6.70758 | 0.741225 | 0.138001 |
| SA 6h | 46.2306 | 8.74852 | 0.802579 | 0.133338 |
| Me-JA 6h | 76.9833 | 14.3873 | 1.31816 | 0.196233 |
Source Transcript PGSC0003DMT400024176 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc04g076300.2 | +3 | 0.0 | 1164 | 629/669 (94%) | genomic_reference:SL2.50ch04 gene_region:58808337-58816333 transcript_region:SL2.50ch04:58808337..58816333- go_terms:GO:0005216 functional_description:Transporter small conductance mechanosensitive ion channel (MscS) family (AHRD V1 *-** A7ZLG1_ECO24); contains Interpro domain(s) IPR006685 Mechanosensitive ion channel MscS |
| TAIR PP10 | AT1G58200.1 | +3 | 0.0 | 639 | 362/622 (58%) | MSCS-like 3 | chr1:21548370-21552488 REVERSE LENGTH=678 |