Probe CUST_284_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_284_PI426222305 | JHI_St_60k_v1 | DMT400024174 | ATGATGCGCATTCTATATGCTTTATGCATTCACTGCCCCTTCTGTCCTCTGTTCGTCTGT |
All Microarray Probes Designed to Gene DMG401009344
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_276_PI426222305 | JHI_St_60k_v1 | DMT400024176 | GCAATACAATTGTTTTGTTGTACCATACACTCCAGCAGAGTTTTGGAGTATTATTTGACT |
| CUST_284_PI426222305 | JHI_St_60k_v1 | DMT400024174 | ATGATGCGCATTCTATATGCTTTATGCATTCACTGCCCCTTCTGTCCTCTGTTCGTCTGT |
| CUST_507_PI426222305 | JHI_St_60k_v1 | DMT400024175 | GCAATACAATTGTTTTGTTGTACCATACACTCCAGCAGAGTTTTGGAGTATTATTTGACT |
| CUST_405_PI426222305 | JHI_St_60k_v1 | DMT400024173 | AGTTATAGGCTTGACCAATAATGGCATCTCAGTTCGCCGAATCATCTATTTTGTGCCGTG |
Microarray Signals from CUST_284_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 24.7614 | 7.63974 | 0.608693 | 0.159338 |
| ABA 1h | 40.3781 | 7.66275 | 1.18212 | 0.298563 |
| ACC 1h | 36.9022 | 4.40678 | 0.951634 | 0.19223 |
| BABA 1h | 37.9235 | 7.82586 | 1.00405 | 0.134466 |
| Chitin 1h | 30.7036 | 3.91361 | 0.91178 | 0.116437 |
| Epi 1h | 31.3472 | 3.88153 | 0.962899 | 0.123757 |
| SA 1h | 40.0542 | 4.22785 | 1.03707 | 0.16883 |
| Me-JA 1h | 39.8898 | 5.36371 | 1.28977 | 0.142538 |
| Control 6h | 48.8314 | 12.4185 | 1.22239 | 0.246583 |
| ABA 6h | 77.5829 | 19.5452 | 1.84798 | 0.512428 |
| ACC 6h | 47.4535 | 6.99288 | 1.08641 | 0.229342 |
| BABA 6h | 46.5994 | 9.64751 | 1.07171 | 0.184896 |
| Chitin 6h | 28.3029 | 4.33021 | 0.708439 | 0.111015 |
| Epi 6h | 53.9885 | 13.3724 | 1.21698 | 0.285044 |
| SA 6h | 41.0179 | 15.9898 | 0.911088 | 0.693329 |
| Me-JA 6h | 34.0276 | 4.13502 | 0.91786 | 0.111508 |
Source Transcript PGSC0003DMT400024174 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc04g076300.2 | +3 | 0.0 | 819 | 422/437 (97%) | genomic_reference:SL2.50ch04 gene_region:58808337-58816333 transcript_region:SL2.50ch04:58808337..58816333- go_terms:GO:0005216 functional_description:Transporter small conductance mechanosensitive ion channel (MscS) family (AHRD V1 *-** A7ZLG1_ECO24); contains Interpro domain(s) IPR006685 Mechanosensitive ion channel MscS |
| TAIR PP10 | AT1G58200.1 | +3 | 0.0 | 535 | 282/438 (64%) | MSCS-like 3 | chr1:21548370-21552488 REVERSE LENGTH=678 |