Probe CUST_49820_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49820_PI426222305 | JHI_St_60k_v1 | DMT400033784 | TGGCAGTGGTATACTCCATGGTAAAAAGTGACTACACAATGCAGCGAAGGTTGTAGTTGA |
All Microarray Probes Designed to Gene DMG400012980
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49820_PI426222305 | JHI_St_60k_v1 | DMT400033784 | TGGCAGTGGTATACTCCATGGTAAAAAGTGACTACACAATGCAGCGAAGGTTGTAGTTGA |
| CUST_49809_PI426222305 | JHI_St_60k_v1 | DMT400033783 | CCATGGAAATAGAAGATGGCGGTACCTTGTATAAATCCAAAGAGAAGATTTTTCATACTT |
| CUST_49813_PI426222305 | JHI_St_60k_v1 | DMT400033782 | TGAATGCTCATGATTCTGTACACAATATGTCCAAGTGTAAGTGTTTCGTAAATCTTGAAC |
| CUST_49797_PI426222305 | JHI_St_60k_v1 | DMT400033786 | GAATTGGATTTGGAGTTCAGATCATAAAATGCTGATATTTAATTGCAGCGAAGGTTGTAG |
Microarray Signals from CUST_49820_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 101.127 | 8.73227 | 1.03821 | 0.0672796 |
| ABA 1h | 80.5022 | 5.65513 | 0.93652 | 0.0632216 |
| ACC 1h | 96.8574 | 18.8956 | 0.935998 | 0.134761 |
| BABA 1h | 98.2592 | 18.0102 | 1.01682 | 0.103965 |
| Chitin 1h | 80.1482 | 18.2975 | 0.872004 | 0.194844 |
| Epi 1h | 68.3682 | 4.90429 | 0.815128 | 0.0586642 |
| SA 1h | 111.355 | 17.037 | 1.09117 | 0.127604 |
| Me-JA 1h | 132.994 | 19.4507 | 1.64399 | 0.151003 |
| Control 6h | 114.506 | 31.5751 | 1.08574 | 0.250883 |
| ABA 6h | 113.104 | 12.5276 | 1.08531 | 0.0871685 |
| ACC 6h | 105.724 | 12.4098 | 0.940047 | 0.0626559 |
| BABA 6h | 99.9712 | 10.8059 | 0.912612 | 0.0796693 |
| Chitin 6h | 96.4895 | 6.49615 | 0.933908 | 0.0629105 |
| Epi 6h | 101.027 | 9.68343 | 0.917811 | 0.138834 |
| SA 6h | 83.6302 | 27.6943 | 0.76022 | 0.228049 |
| Me-JA 6h | 121.763 | 14.0445 | 1.24772 | 0.0785631 |
Source Transcript PGSC0003DMT400033784 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G49645.1 | +3 | 2e-58 | 192 | 101/222 (45%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:18403129-18404427 REVERSE LENGTH=220 |