Probe CUST_49813_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49813_PI426222305 | JHI_St_60k_v1 | DMT400033782 | TGAATGCTCATGATTCTGTACACAATATGTCCAAGTGTAAGTGTTTCGTAAATCTTGAAC |
All Microarray Probes Designed to Gene DMG400012980
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49820_PI426222305 | JHI_St_60k_v1 | DMT400033784 | TGGCAGTGGTATACTCCATGGTAAAAAGTGACTACACAATGCAGCGAAGGTTGTAGTTGA |
| CUST_49809_PI426222305 | JHI_St_60k_v1 | DMT400033783 | CCATGGAAATAGAAGATGGCGGTACCTTGTATAAATCCAAAGAGAAGATTTTTCATACTT |
| CUST_49813_PI426222305 | JHI_St_60k_v1 | DMT400033782 | TGAATGCTCATGATTCTGTACACAATATGTCCAAGTGTAAGTGTTTCGTAAATCTTGAAC |
| CUST_49797_PI426222305 | JHI_St_60k_v1 | DMT400033786 | GAATTGGATTTGGAGTTCAGATCATAAAATGCTGATATTTAATTGCAGCGAAGGTTGTAG |
Microarray Signals from CUST_49813_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 23.8077 | 3.44447 | 1.41241 | 0.205267 |
| ABA 1h | 11.8213 | 4.95642 | 0.674707 | 0.241757 |
| ACC 1h | 17.34 | 7.07188 | 0.834407 | 0.352275 |
| BABA 1h | 21.189 | 8.18453 | 1.13936 | 0.369144 |
| Chitin 1h | 9.49715 | 3.19276 | 0.590012 | 0.220791 |
| Epi 1h | 18.109 | 3.27681 | 1.23358 | 0.228369 |
| SA 1h | 24.8906 | 3.4372 | 1.41947 | 0.201297 |
| Me-JA 1h | 27.7655 | 5.91239 | 1.91092 | 0.361977 |
| Control 6h | 19.5498 | 4.15914 | 1.10128 | 0.225287 |
| ABA 6h | 12.9765 | 3.4409 | 0.711043 | 0.199528 |
| ACC 6h | 7.04606 | 3.92836 | 0.358494 | 0.194863 |
| BABA 6h | 15.4294 | 3.68304 | 0.795481 | 0.204664 |
| Chitin 6h | 17.3383 | 3.71104 | 0.938914 | 0.214259 |
| Epi 6h | 16.0526 | 3.84207 | 0.794087 | 0.212619 |
| SA 6h | 8.56671 | 3.4252 | 0.468622 | 0.224299 |
| Me-JA 6h | 27.2991 | 4.39729 | 1.5825 | 0.219453 |
Source Transcript PGSC0003DMT400033782 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G49645.1 | +3 | 9e-21 | 86 | 41/85 (48%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:18403129-18404427 REVERSE LENGTH=220 |