Probe CUST_49797_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49797_PI426222305 | JHI_St_60k_v1 | DMT400033786 | GAATTGGATTTGGAGTTCAGATCATAAAATGCTGATATTTAATTGCAGCGAAGGTTGTAG |
All Microarray Probes Designed to Gene DMG400012980
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49820_PI426222305 | JHI_St_60k_v1 | DMT400033784 | TGGCAGTGGTATACTCCATGGTAAAAAGTGACTACACAATGCAGCGAAGGTTGTAGTTGA |
| CUST_49809_PI426222305 | JHI_St_60k_v1 | DMT400033783 | CCATGGAAATAGAAGATGGCGGTACCTTGTATAAATCCAAAGAGAAGATTTTTCATACTT |
| CUST_49813_PI426222305 | JHI_St_60k_v1 | DMT400033782 | TGAATGCTCATGATTCTGTACACAATATGTCCAAGTGTAAGTGTTTCGTAAATCTTGAAC |
| CUST_49797_PI426222305 | JHI_St_60k_v1 | DMT400033786 | GAATTGGATTTGGAGTTCAGATCATAAAATGCTGATATTTAATTGCAGCGAAGGTTGTAG |
Microarray Signals from CUST_49797_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 6.04485 | 3.50381 | 0.927629 | 0.537495 |
| ABA 1h | 5.79178 | 3.35838 | 1.00492 | 0.582648 |
| ACC 1h | 6.50827 | 3.77412 | 0.972006 | 0.5632 |
| BABA 1h | 6.4412 | 3.73668 | 1.02393 | 0.592917 |
| Chitin 1h | 6.07097 | 3.53764 | 1.03 | 0.596462 |
| Epi 1h | 5.90804 | 3.42777 | 1.04573 | 0.605552 |
| SA 1h | 5.89531 | 3.42238 | 0.879394 | 0.509567 |
| Me-JA 1h | 6.19636 | 3.6065 | 1.15929 | 0.671272 |
| Control 6h | 6.50238 | 3.7706 | 0.994676 | 0.576103 |
| ABA 6h | 6.85061 | 3.97765 | 0.988174 | 0.573097 |
| ACC 6h | 7.54573 | 4.4575 | 0.990608 | 0.573658 |
| BABA 6h | 7.28709 | 4.25597 | 0.99166 | 0.574495 |
| Chitin 6h | 11.7255 | 4.39065 | 1.52224 | 0.714052 |
| Epi 6h | 7.39839 | 4.34163 | 0.994422 | 0.575826 |
| SA 6h | 6.97751 | 4.04185 | 1.08247 | 0.626836 |
| Me-JA 6h | 6.57772 | 3.81831 | 1.0118 | 0.586081 |
Source Transcript PGSC0003DMT400033786 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G49645.1 | +2 | 9e-26 | 102 | 55/124 (44%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:18403129-18404427 REVERSE LENGTH=220 |