Probe CUST_49809_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49809_PI426222305 | JHI_St_60k_v1 | DMT400033783 | CCATGGAAATAGAAGATGGCGGTACCTTGTATAAATCCAAAGAGAAGATTTTTCATACTT |
All Microarray Probes Designed to Gene DMG400012980
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_49820_PI426222305 | JHI_St_60k_v1 | DMT400033784 | TGGCAGTGGTATACTCCATGGTAAAAAGTGACTACACAATGCAGCGAAGGTTGTAGTTGA |
| CUST_49809_PI426222305 | JHI_St_60k_v1 | DMT400033783 | CCATGGAAATAGAAGATGGCGGTACCTTGTATAAATCCAAAGAGAAGATTTTTCATACTT |
| CUST_49813_PI426222305 | JHI_St_60k_v1 | DMT400033782 | TGAATGCTCATGATTCTGTACACAATATGTCCAAGTGTAAGTGTTTCGTAAATCTTGAAC |
| CUST_49797_PI426222305 | JHI_St_60k_v1 | DMT400033786 | GAATTGGATTTGGAGTTCAGATCATAAAATGCTGATATTTAATTGCAGCGAAGGTTGTAG |
Microarray Signals from CUST_49809_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 13.8564 | 4.41345 | 0.89162 | 0.2626 |
| ABA 1h | 16.5918 | 3.18489 | 1.30059 | 0.267319 |
| ACC 1h | 14.4065 | 3.51213 | 0.939281 | 0.27427 |
| BABA 1h | 12.5729 | 4.88689 | 0.796224 | 0.342187 |
| Chitin 1h | 6.32315 | 3.18833 | 0.489953 | 0.253261 |
| Epi 1h | 10.6146 | 3.22285 | 0.842342 | 0.273508 |
| SA 1h | 17.5211 | 5.30205 | 1.11122 | 0.283521 |
| Me-JA 1h | 20.1987 | 3.58148 | 1.70338 | 0.302991 |
| Control 6h | 20.9495 | 11.8836 | 1.04771 | 0.699564 |
| ABA 6h | 16.3047 | 3.52063 | 1.06667 | 0.238209 |
| ACC 6h | 13.7287 | 4.08995 | 0.785075 | 0.244101 |
| BABA 6h | 12.8329 | 5.31141 | 0.68766 | 0.296886 |
| Chitin 6h | 12.2545 | 3.64734 | 0.791573 | 0.251721 |
| Epi 6h | 14.256 | 5.60532 | 0.754241 | 0.325481 |
| SA 6h | 18.8224 | 3.83308 | 1.29253 | 0.279064 |
| Me-JA 6h | 21.4562 | 6.00854 | 1.37541 | 0.404226 |
Source Transcript PGSC0003DMT400033783 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G49645.1 | +3 | 6e-53 | 178 | 101/246 (41%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:18403129-18404427 REVERSE LENGTH=220 |