Probe CUST_2408_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2408_PI426222305 | JHI_St_60k_v1 | DMT400072207 | TGAAATCAACTCGAATTCGAGTCAGGATTTACGTGCCGTAGCGATTGAGCTTGACGTTAG |
All Microarray Probes Designed to Gene DMG400028097
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2149_PI426222305 | JHI_St_60k_v1 | DMT400072206 | GAGCCTATCTCCTTTCTTACCTTTTAGTAATTGGTTGTATGACGACTAATCTGTCATTTG |
| CUST_2237_PI426222305 | JHI_St_60k_v1 | DMT400072205 | ATAACAAAGAAAATTTAATGGAGAACCATGCTGAAGTAGGACGCCAGCTGGAGCCATGGG |
| CUST_2030_PI426222305 | JHI_St_60k_v1 | DMT400072204 | TTCTCGTTCTGATTTACAACCTGATCAATCGTTGTATTCTTCAAACGTAACAGGTGTTGG |
| CUST_2408_PI426222305 | JHI_St_60k_v1 | DMT400072207 | TGAAATCAACTCGAATTCGAGTCAGGATTTACGTGCCGTAGCGATTGAGCTTGACGTTAG |
Microarray Signals from CUST_2408_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 434.569 | 80.6122 | 2.25916 | 0.260048 |
| ABA 1h | 249.831 | 31.229 | 1.49388 | 0.0924087 |
| ACC 1h | 484.035 | 132.872 | 2.31036 | 0.589493 |
| BABA 1h | 448.734 | 104.351 | 2.33313 | 0.405799 |
| Chitin 1h | 348.925 | 25.4482 | 2.07179 | 0.121436 |
| Epi 1h | 351.717 | 20.6157 | 2.17893 | 0.127584 |
| SA 1h | 688.092 | 215.36 | 3.17935 | 1.13804 |
| Me-JA 1h | 838.418 | 167.398 | 5.2912 | 0.623156 |
| Control 6h | 89.9472 | 28.1637 | 0.418165 | 0.140762 |
| ABA 6h | 69.093 | 8.51188 | 0.343136 | 0.027903 |
| ACC 6h | 103.232 | 7.48787 | 0.481033 | 0.0927273 |
| BABA 6h | 88.1454 | 21.8716 | 0.390079 | 0.107578 |
| Chitin 6h | 62.3432 | 5.3696 | 0.312458 | 0.0346804 |
| Epi 6h | 64.8832 | 19.9454 | 0.282547 | 0.0961741 |
| SA 6h | 41.6642 | 4.53748 | 0.223561 | 0.0521939 |
| Me-JA 6h | 50.058 | 19.8806 | 0.230968 | 0.0769054 |
Source Transcript PGSC0003DMT400072207 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g080900.1 | +1 | 5e-167 | 472 | 263/288 (91%) | evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch10 gene_region:61395439-61397612 transcript_region:SL2.50ch10:61395439..61397612+ go_terms:GO:0008152,GO:0055114 functional_description:3-oxoacyl-reductase (AHRD V1 **-- B6UEX0_MAIZE); contains Interpro domain(s) IPR002347 Glucose/ribitol dehydrogenase |
| TAIR PP10 | AT3G55290.1 | +1 | 6e-112 | 331 | 183/281 (65%) | NAD(P)-binding Rossmann-fold superfamily protein | chr3:20502653-20503730 FORWARD LENGTH=280 |