Probe CUST_2237_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2237_PI426222305 | JHI_St_60k_v1 | DMT400072205 | ATAACAAAGAAAATTTAATGGAGAACCATGCTGAAGTAGGACGCCAGCTGGAGCCATGGG |
All Microarray Probes Designed to Gene DMG400028097
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2149_PI426222305 | JHI_St_60k_v1 | DMT400072206 | GAGCCTATCTCCTTTCTTACCTTTTAGTAATTGGTTGTATGACGACTAATCTGTCATTTG |
| CUST_2237_PI426222305 | JHI_St_60k_v1 | DMT400072205 | ATAACAAAGAAAATTTAATGGAGAACCATGCTGAAGTAGGACGCCAGCTGGAGCCATGGG |
| CUST_2030_PI426222305 | JHI_St_60k_v1 | DMT400072204 | TTCTCGTTCTGATTTACAACCTGATCAATCGTTGTATTCTTCAAACGTAACAGGTGTTGG |
| CUST_2408_PI426222305 | JHI_St_60k_v1 | DMT400072207 | TGAAATCAACTCGAATTCGAGTCAGGATTTACGTGCCGTAGCGATTGAGCTTGACGTTAG |
Microarray Signals from CUST_2237_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 6.0544 | 3.18667 | 0.80014 | 0.425995 |
| ABA 1h | 7.83852 | 3.12519 | 1.11688 | 0.491468 |
| ACC 1h | 8.56467 | 3.51402 | 1.07341 | 0.469361 |
| BABA 1h | 8.05229 | 3.38962 | 1.01222 | 0.493153 |
| Chitin 1h | 7.48603 | 3.28329 | 1.02156 | 0.500409 |
| Epi 1h | 9.69236 | 3.20456 | 1.37823 | 0.55017 |
| SA 1h | 8.44036 | 3.19606 | 1.08161 | 0.414137 |
| Me-JA 1h | 9.4899 | 3.60408 | 1.35161 | 0.657849 |
| Control 6h | 5.92616 | 3.43636 | 0.78388 | 0.454123 |
| ABA 6h | 7.86017 | 3.52684 | 0.965477 | 0.451096 |
| ACC 6h | 8.32423 | 4.07638 | 0.95867 | 0.460816 |
| BABA 6h | 8.473 | 3.82271 | 0.93788 | 0.467653 |
| Chitin 6h | 7.5639 | 3.74404 | 0.917903 | 0.475065 |
| Epi 6h | 7.48482 | 3.89224 | 0.865547 | 0.454194 |
| SA 6h | 8.62458 | 3.58475 | 1.13042 | 0.496345 |
| Me-JA 6h | 11.6983 | 3.48878 | 1.46376 | 0.500877 |
Source Transcript PGSC0003DMT400072205 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g080890.1 | +3 | 1e-174 | 492 | 275/291 (95%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:61391472-61393927 transcript_region:SL2.50ch10:61391472..61393927+ go_terms:GO:0008152,GO:0055114 functional_description:3-oxoacyl-reductase (AHRD V1 **-- B6UEX0_MAIZE); contains Interpro domain(s) IPR002347 Glucose/ribitol dehydrogenase |
| TAIR PP10 | AT1G63380.1 | +3 | 4e-115 | 340 | 180/290 (62%) | NAD(P)-binding Rossmann-fold superfamily protein | chr1:23505582-23506504 FORWARD LENGTH=282 |