Probe CUST_2317_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2317_PI426222305 | JHI_St_60k_v1 | DMT400072464 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
All Microarray Probes Designed to Gene DMG400028192
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2317_PI426222305 | JHI_St_60k_v1 | DMT400072464 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
| CUST_2114_PI426222305 | JHI_St_60k_v1 | DMT400072461 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
| CUST_2256_PI426222305 | JHI_St_60k_v1 | DMT400072463 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
| CUST_2198_PI426222305 | JHI_St_60k_v1 | DMT400072462 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
Microarray Signals from CUST_2317_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 167.566 | 25.7681 | 0.823841 | 0.120305 |
| ABA 1h | 222.533 | 60.1875 | 1.1821 | 0.233212 |
| ACC 1h | 195.954 | 49.1525 | 0.885108 | 0.209464 |
| BABA 1h | 219.306 | 48.7977 | 1.07738 | 0.171505 |
| Chitin 1h | 219.808 | 37.4263 | 1.19937 | 0.124577 |
| Epi 1h | 155.327 | 13.4773 | 0.897638 | 0.0562329 |
| SA 1h | 272.711 | 70.9114 | 1.24075 | 0.28314 |
| Me-JA 1h | 373.286 | 69.3192 | 2.21787 | 0.262175 |
| Control 6h | 215.634 | 74.2956 | 0.933918 | 0.330257 |
| ABA 6h | 556.947 | 138.388 | 2.44076 | 0.630885 |
| ACC 6h | 198.613 | 39.1499 | 0.841817 | 0.0515716 |
| BABA 6h | 244.554 | 34.172 | 1.08034 | 0.108517 |
| Chitin 6h | 144.889 | 12.8033 | 0.68084 | 0.0430296 |
| Epi 6h | 185.682 | 61.9173 | 0.74733 | 0.236635 |
| SA 6h | 119.093 | 36.623 | 0.538968 | 0.142337 |
| Me-JA 6h | 520.208 | 104.475 | 2.50795 | 0.382604 |
Source Transcript PGSC0003DMT400072464 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g080930.1 | +2 | 0.0 | 798 | 438/456 (96%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:61435700-61439911 transcript_region:SL2.50ch10:61435700..61439911- go_terms:GO:0005634 functional_description:Transcription elongation factor A protein 2 (AHRD V1 *--- TCEA2_HUMAN); contains Interpro domain(s) IPR010990 Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal |
| TAIR PP10 | AT5G05140.1 | +2 | 6e-98 | 315 | 214/478 (45%) | Transcription elongation factor (TFIIS) family protein | chr5:1520353-1522297 FORWARD LENGTH=436 |