Probe CUST_2114_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2114_PI426222305 | JHI_St_60k_v1 | DMT400072461 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
All Microarray Probes Designed to Gene DMG400028192
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2317_PI426222305 | JHI_St_60k_v1 | DMT400072464 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
| CUST_2114_PI426222305 | JHI_St_60k_v1 | DMT400072461 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
| CUST_2256_PI426222305 | JHI_St_60k_v1 | DMT400072463 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
| CUST_2198_PI426222305 | JHI_St_60k_v1 | DMT400072462 | ACACAGATATTTGGGGAGGTGATGAGGATCAAAGATGTCATTGATAACAACCAAGCTGAG |
Microarray Signals from CUST_2114_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 164.295 | 19.5621 | 0.795183 | 0.0628993 |
| ABA 1h | 214.95 | 41.081 | 1.14808 | 0.145954 |
| ACC 1h | 213.923 | 52.9069 | 0.954322 | 0.198822 |
| BABA 1h | 201.744 | 36.0324 | 0.988812 | 0.0946566 |
| Chitin 1h | 208.1 | 28.9076 | 1.11414 | 0.0675051 |
| Epi 1h | 150.608 | 14.4091 | 0.845745 | 0.0624261 |
| SA 1h | 308.594 | 44.48 | 1.44443 | 0.116533 |
| Me-JA 1h | 391.065 | 68.3238 | 2.2704 | 0.252921 |
| Control 6h | 218.502 | 82.7588 | 0.881507 | 0.384876 |
| ABA 6h | 540.301 | 143.318 | 2.28536 | 0.621431 |
| ACC 6h | 178.545 | 25.8819 | 0.745794 | 0.0804205 |
| BABA 6h | 243.839 | 52.2739 | 1.01511 | 0.200722 |
| Chitin 6h | 148.588 | 13.6669 | 0.678733 | 0.0611849 |
| Epi 6h | 184.031 | 56.0629 | 0.736003 | 0.213632 |
| SA 6h | 128.841 | 36.4151 | 0.57147 | 0.143307 |
| Me-JA 6h | 537.486 | 123.182 | 2.47886 | 0.486047 |
Source Transcript PGSC0003DMT400072461 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g080930.1 | +2 | 0.0 | 774 | 438/506 (87%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:61435700-61439911 transcript_region:SL2.50ch10:61435700..61439911- go_terms:GO:0005634 functional_description:Transcription elongation factor A protein 2 (AHRD V1 *--- TCEA2_HUMAN); contains Interpro domain(s) IPR010990 Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal |
| TAIR PP10 | AT5G05140.1 | +2 | 9e-89 | 292 | 214/528 (41%) | Transcription elongation factor (TFIIS) family protein | chr5:1520353-1522297 FORWARD LENGTH=436 |