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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5079_PI390587928Hv_44K_v2AAAGAATGGATGGTTATATACCTGCTCATTTTACAGCCATCGCCTATGCTCTCTCGCCCT495GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35880810742e-24518 - 57710060 / 60plus ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOCAK35967812113e-21619 - 6789758 / 60plus ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 ABC49982
Harvest21ABC343916343e-25496 - 55510060 / 60plus
Harvest21ABC030747303e-2512 - 7110060 / 60plusABC03074
Harvest35U35_384286343e-25496 - 55510060 / 60plus
Harvest35U35_10057303e-2512 - 7110060 / 60plus
Harvest35U35_100218723e-251734 - 179310060 / 60minus



Contig Sequence (634 bp)

>U35_38428 634 Hv_44K_v2
GCCCTCCCCTTCTCCTACTCTCCCCCGTATCCCTCCCCTTCTCCTGCTCTCCCTCCCAGC
GGCGGCCGCCTCATCGGCGGCGAGCCTCGTCGGATGCGCTCCTCGACGGCTTCGGGTACC
TCCCCGCGCGGCCCTTGGGCCAAGAAGGACACCATCGACAAGGTGTGCGGGATCGTCAAG
AAGGAGCTGGTCGTCGCCCAAGACACCCTCGTCAACGGGGACACAAAGTTCGCCGACCTC
GGCGCAGATTCCCTCGACACGAGAATTAAAGAAATTGTGTGTGCAGCTGAGCTGAGGCTC
GATAAGGTGTCGCTTTGGTTGGTTCTGTCTCGCTCGAATCGCCTTGGCCTGTTAAAAAGC
GCTCCACAGCGCCTCCAAACTCCAAGCCTCCAACGTACACGACCCTCAGCATCCGATCGA
CCAACGACGGTGGTTCGGTTACTACAGTGTCACAGACTAGTCGTGCTACCTTCTAAGTGG
TTACTAATTGTAGCAAAAGAATGGATGGTTATATACCTGCTCATTTTACAGCCATCGCCT
ATGCTCTCTCGCCCTCTTCGATGAGGCGACGTCTCCCTGCTCCTTCCACGGCATGACGGC
AGTGCACTGCATCGTGTAAAGCACCCCCATGCTG



Homology of Contig U35_38428 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None