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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39297_PI390587928Hv_44K_v2GTACATTTCATTTCCTGTCAATTATTGCATCTAAGTTATTGGATCACTCATTGACCACTG295GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_72123.38402e-24489 - 54810060 / 60plus ABC01488 ABC11000 ABC23356 ABC37639 ABC38653 ABC40217 ABC45008 ABC45560 ABC47039
JLOC1JLOC1_47977.27888e-25424 - 48310060 / 60plus
JLOC1JLOC1_29356.814146e-211036 - 10949757 / 59plus
JLOC1JLOC1_29356.511946e-21816 - 8749757 / 59plus
JLOC1JLOC1_29356.19276e-21549 - 6079757 / 59plus
Harvest21ABC455606853e-25296 - 35510060 / 60minusABC45560
Harvest35U35_460336853e-25296 - 35510060 / 60minus



Contig Sequence (685 bp)

>U35_46033 685 Hv_44K_v2
TTTTTTTTTTTTTTTTTAACTTGAACCCCTTTTCCAAGTTACCATTTCTGGGGTATTCAA
ATCACATACACAATCATTATTTTGAACAATCCAAAGAGCAAACAGAATTCGTCCAAAACA
ACACTACATTAGTCTATTACAATCGTTACATTATACTACAGCCCAAATAAGCCTACTACT
GCCTACAATTACAACACATAATATGCTAGTCTTTTCTGATATGCTTCACAGCTTCAGACT
TGGATTCGCACTTCACCTGTGCAAAAAATAAGAATAAACATATAAGAATAAGAAACAGTG
GTCAATGAGTGATCCAATAACTTAGATGCAATAATTGACAGGAAATGAAATGTACATAAA
TAGTATGACTAACATTAATCAGTATGTGTTTATGAAGCGACTAAAATGTTCTCAAACAAC
AACACAATCATACAACAGAACTGTAGTTGAAAAAATTCTGCAGAAACAAATGCTGCTGCT
GCTCCTCTACAGTCTGAATGTACAGGGTAAATTCAATCAAGTTCATTGTTAAGCTACCAC
CATTCGGGTTAAGGAGCATTGTGCTCAAATCTCATCTGGCAAGCAGAATTCCTCCTAGAC
ATCAAAGATTTCTGACAGTTTTAAGCTACCACCATTCTCAACAGTGAACATTGAAGGAGG
TGTTTATGTTTAACAAACAAAACAG



Homology of Contig U35_46033 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None