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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_3325_PI390587928Hv_44K_v2AATTCCCTTCCTTTGCCACCCCTGGGCAAAGCGGAGGAAAAGGGGGCATCTTTTCCGATC231GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36218720642e-24478 - 53710060 / 60plus ABC14500
MLOCAK36479647762e-24414 - 47310060 / 60plus ABC00308 ABC00497 ABC00589 ABC00594 ABC00626 ABC00838 ABC00842 ABC00859 ABC00965 ABC00997 ABC01004 ABC11228 ABC14500 ABC35392 ABC36259 ABC45928
MLOCAK35875322462e-24557 - 61610060 / 60plus ABC14500
MLOCMLOC_56087.318032e-24286 - 34510060 / 60plus ABC14500
MLOCMLOC_56087.118952e-24329 - 38810060 / 60plus ABC14500
MLOCMLOC_56087.219982e-24329 - 38810060 / 60plus ABC14500
JLOC1JLOC1_36250.120188e-25334 - 39310060 / 60plus
Harvest21ABC256317093e-25232 - 29110060 / 60plus
Harvest35U35_118927093e-25232 - 29110060 / 60plus



Contig Sequence (709 bp)

>U35_11892 709 Hv_44K_v2
CAGCCGCTGCGGCCTAGCCTGACTGTTCTCCACGACGCTGCGGCCTCCCCCGCTGTCTTT
TGACCGCTCCAAACTAGCTTTCTTGCTTCTCTTCCTCCTTGATCGCGGCTAGCCATGGGG
TGGTTATGACACACGGCTTGCTGTTCCTCCGGTAGCGACACGGCACCCGCTGCCGCATCG
TAACCGGCGGCCTGCCCTTTCCGATCCATCTGGGAAGTCAGCTCCTCCCGAAATTCCCTT
CCTTTGCCACCCCTGGGCAAAGCGGAGGAAAAGGGGGCATCTTTTCCGATCCCGGCAGCT
TGAGAGGCACACCATCCTCCCCTCATCTCAAGCTCTTCTTCCTCTTCTTCTTCTTCCCGA
GCTTGATTCAGGCTCTGGTGCAGCGGTTCTGAGCAGATCCCCGTGCCGGAGGGATCTTCT
TGTAGACAGAGCCACGCGGTCTGTTCCCCTGCCTCTGCCCAAGCTCTGTTCCAGTTTTGG
GGCTCCGTCCTTCCCGCTGCTCTGTTGCGGCACAGCCCCATGGACGGCCTCCCGGACACG
GCGCCGCCCGCGCCGACGCCGTCGCAGCAGCAGCCGAAGCGGGACGAGTGGAGCGAGAGC
GGCATCTCGCGCCTGCTCGAGGCCTACGAAGCCAAGTGGCTGCTCCGCAACCGGGCCAAG
CTCAAGTGGAGCGACTGGGTCGACATCGCCCACGACGTCTCCGCCCACT



Homology of Contig U35_11892 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None