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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_25347_PI390587928Hv_44K_v2ACACTCCTTGGCTGCTATCGACCAAAATTTTCACAAATCTGTCTACATGTTTTGTTTCTA38GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_61163.12462e-24136 - 19510060 / 60plus ABC03062 ABC03063 ABC03065 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
JLOC1JLOC1_39955.13028e-25136 - 19510060 / 60plus
Harvest21ABC343006223e-2539 - 9810060 / 60minus
Harvest21ABC0306714272e-211333 - 13919757 / 59plusABC03067
Harvest35U35_383586223e-2539 - 9810060 / 60minus
Harvest35U35_100414152e-211274 - 13329757 / 59plus



Contig Sequence (622 bp)

>U35_38358 622 Hv_44K_v2
TTTTTTTTTTTTTTTTTGATAGGATATTTGTAAATATATAGAAACAAAACATGTAGACAG
ATTTGTGAAAATTTTGGTCGATAGCAGCCAAGGAGTGTAGTAGTTGAGCAGTAGGTCCCC
AGGAAGAAGGCCTATACACTATCACATTATGAAGAACTATCTGTCAAAGGATCAAAGTAG
TGTCCGCCACTCTCGCAAACAACCATACAATATCAATACTTATTTGTATGCACTCGCAAC
CATCTGATTAGTAGGTAGTCATATCAACCAGAGAAGTTGTTGCTTCACAAGTCAAACATT
CAGACAAGTCCTTGAGAACTGAGTTGATAGCTTGTTGTGGTTCATTTTCACATCAACAGT
TTCCATCAGTTCAGAACCATCTTTACCTCCACTGCAAAGCATCTTCAACATCATAGGGCA
GTTCAAAAGCAAGAAAAGTAGATGCACAGAATGCTTCTTTACGAGCAATGCATTCTCTTT
CTGCAGCAACTGATGCAAGATTTCCATTACAGAAATAAATCCAAATTTTTCACGCTCCCG
GTTGGAATCACTAGTCCTTACAATGAGGATCATTATGGATAATGCATCAACACGAATACC
CTCTTCCGAATATTTTAGCGCA



Homology of Contig U35_38358 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None