barSeed - Barley Seed Development Database

Probe ABC49680

Source Contig ABC49680

barSeed

Links

Affymetrix Source Sequence (553 bp)

>ABC49680 553
TGTGTTTTGCTTGATTCTTTCATTATTTTTCAGTTCCTTTATTTTCATTACCGGAAGCAA
AGTGCGCGTGATGAACTATAGACAATTTGGATAAAGCCTGATGCACAGGGAACGAAGTTA
GATATGGGGCTACACCTGCATGGGGATTGTGCGTTTTTCTTGGAAAGCTGCACAATAGCC
ACTCCCCGTGCAGAACTGCAGAGACAAGGTCACACGCTTAATTTTCGTTTAATTATCTGT
GGCGCCGCATGGTTAAGGGATGAAATTTGTTAAGGATAGATGCAGGGGGGTGCTGTGTTA
GAATCCCCAAAATGCGTACTCGGGGTCATGCTATATCTGTACATCATAAAGTGATTTGTG
GTTCTTCATGGTATCTCTATTTTTGAAGCGGTAACGTATGATCTGGCCATTGTCGTCGGA
TGCTCAGAATCTCATACGCATCCAGTCTCCTCCCGTGACTCTAAATATGGTTCTGCATTA
ATCATTTGCAAGTTTTTCTTGTGTGGGACTAACCCAAGTTTATTCGAGTGTTCATCACAC
GAAAAGCGCACAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK361243	1917	0.0	1254 - 1805	95	527 / 553	CUST_32095_PI390587928 CUST_18171_PI390587928 CUST_6544_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14390.1	2815	0.0	32 - 588	93	523 / 560	CUST_8622_PI390587928 CUST_32095_PI390587928 CUST_18171_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14390.2	2019	0.0	31 - 587	93	523 / 560	CUST_8622_PI390587928 CUST_32095_PI390587928 CUST_18171_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14390.4	1977	0.0	1 - 462	94	436 / 465	CUST_8622_PI390587928 CUST_32095_PI390587928 CUST_18171_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14388.1	501	1e-174	61 - 500	92	406 / 441	CUST_8622_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14390.3	3017	2e-53	807 - 925	98	119 / 121	CUST_8622_PI390587928 CUST_32095_PI390587928 CUST_18171_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194