barSeed - Barley Seed Development Database

Probe ABC37822

Source Contig ABC37822

barSeed

Links

Affymetrix Source Sequence (588 bp)

>ABC37822 588
AATGTTTACCTTTGCTTTGGTGGGGAATACGACATATGTAGGGAGATATGGGGCTACACC
TGCATGGGGATTGTGCGTTTTTCTTGGAAAGCTGCACAATAGCCACTCCCCGTGCAGAAC
TGCAGAGACAAGGTCACACGCTTAATTTGCGGTGAATGAGCTGTGGCGCCGCATGGTTAA
GGGATGAAATTTGTTAAGGATAGATGCAGCAGTCTGCTGTGTTAGAATACAAAAAATGCG
TACTCGGGGTCATGCTATATCTGTACATCGTATGGTGATTTGTGGTTCTTCATGGTATCT
CTATTTTTGAAGCGGTGACGTATGATCTGGCCATTGTCGTCGGATGCTCAGAATCTCATA
CGCATCCAGTCTCCACCCTGACTCTAAATATGGTTCTGCATTACTCATTTGCAAGTTTTT
CTTGTGTGGGACTAACCCAATTTTATCCAAGTGTTCATCACATGAGCTGCGCACATTGAC
GTTTGCAAGTGAGGACTGAAGAGCCCAATAAAGTGATTTGCTAATTCTCATTTATATACT
ACTCTCTCGGTTTCTAAATATAAGCCTTTTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK361243	1917	0.0	1373 - 1904	99	531 / 532	CUST_18171_PI390587928 CUST_32095_PI390587928 CUST_6544_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14388.1	501	0.0	1 - 500	98	490 / 500	CUST_8622_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14390.1	2815	0.0	1 - 471	98	462 / 471	CUST_8622_PI390587928 CUST_32095_PI390587928 CUST_18171_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14390.2	2019	0.0	1 - 470	98	461 / 470	CUST_8622_PI390587928 CUST_18171_PI390587928 CUST_32095_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14390.3	3017	0.0	1 - 467	98	458 / 467	CUST_18171_PI390587928 CUST_32095_PI390587928 CUST_8622_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194
MLOC_14390.4	1977	2e-164	1 - 345	97	336 / 345	CUST_32095_PI390587928 CUST_18171_PI390587928 CUST_8622_PI390587928	ABC09506 ABC37822 ABC49680 ABC50194