barSeed - Barley Seed Development Database

Probe ABC34305

Source Contig ABC34305

barSeed

Links

Affymetrix Source Sequence (580 bp)

>ABC34305 580
GTCAGGCCTGCACGGTTGAGGATTCAAATGTGTCTCGAAGCGTGACTGAACTGTCTGGAT
ATATTCTCCTCCTATTTGATATCTCCATTGGTGGAAGTTTTATTGCAAGATTGTAGAGTT
GGAAATTCGGCTAGTGCGGGGACTTGCTGAAGCTATCAAATTGGTTTGGACTTCTGATTA
GTGATACTGAAGCATATTACGTTATTTGGTCTTTGTGGTAGTTTTCAATTTGAACTTGCA
CTCGGTGGCCTCATCTCTTTGGCGCAGCTTGGAGTTGAAAATGCTAGAAGTCTCAAACAA
GGGTCCGGAATGGAAATATCAGTTCATACTCAGTTTGTATAGCAGATTATCAAATTTTGG
TTTGGCTATAAATTACTTGGTTACCATACTGTTTCAGGAAGTTAGGCTTTGACATTTGGC
TGCTTGTATCTTTGAACTTGCAAATTTATCCCCTATGATAGGAAGTAAAGATCGCATGTA
CATGAGCTCTGAATGCAGTAAAAATGTTCATACATTTATGTATGAATTGGTCATACTTGG
ATTTGTGGGTTTACTGTTCTTCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_67566.1	6862	0.0	1693 - 2166	99	471 / 474	CUST_25328_PI390587928 CUST_13376_PI390587928	ABC07669 ABC17988 ABC20754 ABC30471 ABC34305 ABC38921
MLOC_67568.1	8628	5e-95	2137 - 2325	100	189 / 189	CUST_13551_PI390587928 CUST_13376_PI390587928 CUST_18617_PI390587928 CUST_25328_PI390587928	ABC07669 ABC17988 ABC20754 ABC30471 ABC34305 ABC38921
MLOC_67568.4	6839	5e-95	576 - 764	100	189 / 189	CUST_13551_PI390587928 CUST_18617_PI390587928 CUST_25328_PI390587928	ABC07669 ABC17988 ABC20754 ABC34305 ABC38921
MLOC_67568.2	8046	6e-144	2131 - 2407	100	277 / 277	CUST_13376_PI390587928 CUST_18617_PI390587928 CUST_13551_PI390587928 CUST_25328_PI390587928	ABC07669 ABC17988 ABC20754 ABC30471 ABC34305 ABC38921
MLOC_67568.3	8388	5e-95	2121 - 2309	100	189 / 189	CUST_25328_PI390587928 CUST_13376_PI390587928 CUST_18617_PI390587928 CUST_13551_PI390587928	ABC07669 ABC17988 ABC20754 ABC30471 ABC34305 ABC38921
AK250402.1	6765	5e-95	6179 - 6367	100	189 / 189	CUST_25328_PI390587928 CUST_13551_PI390587928 CUST_18617_PI390587928	ABC07669 ABC17988 ABC20754 ABC34305 ABC38921