barSeed - Barley Seed Development Database

Probe ABC24268

Source Contig ABC24268

barSeed

Links

Affymetrix Source Sequence (825 bp)

>ABC24268 825
GCTGGCCCTCAGCTCGCTCCCTCTCGCCTCAGTTCGACCGGACCTGCTAGTCTCTGACAG
TAGCACCACGGTCGCCCTCCGGTGAAATCCACCATAGCCGAAGCCCCTAGCTGCGCCCCG
CCACACCAGCCACCCCCTGAGCCCCCTCGAAGCCTCGCCGCTGCTCGAGCTCGAGGAAGA
GCCGTTGTAGAACGAAGCAACAGAACTAGAAACTTCGTCCGCCATTATTGAAGCTCCGCC
CAGCCCCGAGCTCCGTTGCTCTCATAACCACCAAAAATGGATGCAGCATGCCCCCACGAG
CATGTGCATAGTCGGAGCGCGACGGGAGGTGCCATGTGCCGCCGGTGAGCCTTGCCGGAA
GGTTGCCTCTGCTCTGCCCAGTCTCGCGCGGGAGGAAGCAGGAGGATCCGACAGGCGGGT
CCCGCCTGTCGGTGAGCCACCCTCAGGCCCGAGTGGCGCTGCCCTGCTGGTGTGCCCCCC
CCCCCCCATAGGCTTTTGAAGAGAGGATACCTACTCCAAGATGTTGGGGTACACATCACC
CTCCTCAAACCCTAAGATTGCGTTCGGAGAGTAGCACATTGCCGTCAACCCCGGAACCTA
GGAGTCAAGGATAGCAGCCTTGTGAGATAAGAATTCATCCAGGTCAGTTGTTCCTATGGG
AATGGAATCCCATGGGCAGTGGAGATTCCTCGAGCCGCTTCAGCCGTCAACCTCAGACTT
TTGTTCAGCCTAGTTGACCTTCATGGTTTTGAAACCTAGATTTTGTATTTTTCTTGGTCA
TTCTGTATCAACTAAGTTTCTACCAGCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373534	842	0.0	28 - 817	82	661 / 804	None	ABC24268
MLOC_25865.1	1042	1e-106	658 - 1042	85	329 / 387	None	ABC24268
AK370907	809	6e-105	479 - 805	88	289 / 329	CUST_3683_PI390587928	ABC13024 ABC20255 ABC20943 ABC24039 ABC24268 ABC26250
MLOC_78314.1	737	2e-95	2 - 426	82	350 / 428	None	ABC24268
AK374319	1069	9e-94	491 - 806	86	274 / 317	None	ABC13024 ABC20255 ABC20943 ABC24039 ABC24268 ABC26250
AK373565	1183	1e-81	542 - 796	88	225 / 255	None	ABC13024 ABC16591 ABC17862 ABC20255 ABC20943 ABC24268 ABC26250 ABC31291
AK371480	792	2e-79	530 - 792	87	230 / 264	None	ABC13024 ABC20255 ABC20943 ABC24039 ABC24268 ABC26250