barSeed - Barley Seed Development Database

Probe ABC12510

Source Contig ABC12510

barSeed

Links

Affymetrix Source Sequence (733 bp)

>ABC12510 733
AAAGGAAGCCGGCAATAACGAGGGCGAGGGGAAGAAGAAACAGAGCAAGCCCAAGGACGC
GGACAGGTCCCTACCCCCAGCGCCAGCGCATGTGCCGAGGCACCCGCACCACGAATTCAA
TCCTTACAACGCGCCGCAGCCGGTGATGAGCTACAACATGGCGCAGCCGAGAGCCAGCGT
GTCCCACTACGCGCCGCAGCCGGAGCAGGGCTACTCGCAGCCGCAGGCCGGCTACTCGTC
CATGACGCAGCACTCACCGGCGCAGCAGGCCTACTCCCAGCACGCGCAGCCAATGCAGCA
ATGGTCGCCATCATACCTATACATGCCGTACCCGCACGCGTCGCCGGAGTCCTACTACCA
AGACTACTACAGCCCGCCCGGGACGAACGCGTCGCCGCCGCCCCCGCCGCCGCTCCACGA
CTCGTACAGCCTATTCGACGACGAGAACCCCAACTCGTGCAGCGTCATGTGACCAAGGAG
GGAGGCGGGGCTTGGTAATCGTAACAGAGACCTCTCTGGTTCTAGCTAGAGTGTCTTGAT
AATCTCTTCGATTGGGAGGTCAAAGCTCTCTCTTGTCTAATCCTTTTTTCTTCTCTTCTT
CCTCTTTAATTTCTTCTTTTGTTATTGCTACTATTTCTGTTCTAAATAGAGCATGTAATT
GTAATGGGATACGCCTTTACATGTAGTACTAGCATCAATGAAATATCTTGTTCCCTAAAA
AAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_72579.2	1178	0.0	469 - 1178	100	710 / 710	None	ABC04477 ABC04478 ABC04479 ABC12510
MLOC_72579.1	1443	0.0	769 - 1443	100	675 / 675	CUST_29133_PI390587928	ABC04477 ABC04478 ABC04479 ABC12510
MLOC_62051.1	1674	4e-87	332 - 785	80	383 / 479	CUST_24544_PI390587928	ABC04477 ABC04478 ABC04479 ABC12510
MLOC_62051.5	1288	4e-87	48 - 501	80	383 / 479	None	ABC04477 ABC04478 ABC04479 ABC12510
MLOC_62051.3	1432	4e-87	269 - 722	80	383 / 479	CUST_24544_PI390587928	ABC04477 ABC04478 ABC04479 ABC12510
AK249008.1	1480	6e-55	984 - 1166	89	162 / 183	CUST_29135_PI390587928	ABC04477 ABC04478 ABC04479 ABC12510