barSeed - Barley Seed Development Database

Probe ABC04479

Source Contig ABC04479

barSeed

Links

Affymetrix Source Sequence (1328 bp)

>ABC04479 1328
TAGGAACTGAATGGATACACCACCGCCGCCTTTTGTGCTAACTATGTGGTCGTACTCCAT
GCATCCCCATCCGGCCGCTATAAGTTGAGCAGCACACAGCAGCGGCCTCCCCTGAGTTCC
AAGTCCGTAGAGAGCACTCCCATCCCATGGCGTCTGGACAACCGGCCGTGCAGACCTTGG
TTCTGAGGGTTTCCATCCACTGCCATGGCTGCAAGAAGAAGATCCGCAAGGTGCTCAAGA
GCATCCAAGGCGTGCAGGACGTGGAGGTAGATGCCCAGCAGCACAAAGTGATGGTGACGG
GCACCGTGGACGCCGAGACGCTCGTCAAGAGGCTCTGCAAGTCTGGCAAGCAGGCACTGC
CATGGCAACACGAGCCCGCCGCGCCTGCCAAGAACCCCGAGGCCTCACCGCCGGCCACTC
CGGCTCAGGACGGCGGCAAGGACGATGCTGCTGCGGCGGCGGACAAGAAGCCAGCGGAGC
CTGTGAAGGAGCCGCAGGCCGACGACAGCTCGGACAAGAAGCCGGAGCAGGAGGAGACGG
CCCCGGAGAAGACGCCTCAGACGGACGAGGAAGCAGAGTCTGAGAAGAAGGAGGCTGAGA
AAGAGGAGGCGAAAGCAAGCGACGAGGCAAAGGAAGACGCCGGCGACGGCGAGGGCCCAG
CGGCCGAGCCCAAGGCAAAGGAGGACATAAAGGACGCCGGCAGTGACGAGGGTGAGGCCA
GGAAGAAACAGAGCAAGCCCGACGCCGCACCCGCCGCCGACAGGTCCCTCTCTCCGGCGC
CGGAGCACGCGCACCAGGAGTTCAGCCCGTACAACGCGCCGCAGCCGGTGATGAGCTACC
ACACGGCGCAGCCGGGAACGAGCGTGTCCTACTACGCGCCGCAGCCGGAGCAAGGCTACA
CCATGCGGCAGCAGCCCGGGTACTCCTCCGTCATGCAGCCGCGGCACCCACCGACGGCGC
CGCAGCAGCAATGGTCGCCGTCGTACCTTTACATGCCGTACCCGCACGCGTCGCCGGAGT
CGTACTACCAGGACTACTACAGCCCGCCGGGGACGCACGCGCCGCCACCACCTCCGGCGC
CGCTCCAGGACTCGTATCGCCTGCTCGACGACGAGAACCCCAACTCGTGCAGCGTCATGT
GATTTTTTCACCGACACGTACGGCGTACGGCACAGCGCGGCTCCGGCTAGCCACCGGCGG
CAGAGTAGCTAAGAAGACGGCTTCGTAATATATAGAGACCTCTCTGGTTGTAGCTAGAGT
AGCTTGTTACCTCTTCCACGATTGGAGGTCAAAGCTCTCCTGTTCCTCTTCTTTTTTATT
ATTGTTAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62051.3	1432	0.0	81 - 1410	99	1328 / 1330	CUST_24544_PI390587928	ABC04477 ABC04478 ABC04479 ABC12510
MLOC_62051.1	1674	8e-86	1487 - 1659	100	173 / 173	CUST_24544_PI390587928	ABC04477 ABC04478 ABC04479 ABC12510
MLOC_62051.5	1288	8e-86	1108 - 1280	100	173 / 173	None	ABC04477 ABC04478 ABC04479 ABC12510
MLOC_62051.2	1140	7e-57	81 - 214	97	130 / 134	CUST_24544_PI390587928	ABC04477 ABC04478 ABC04479
MLOC_62051.4	934	1e-54	69 - 198	97	126 / 130	CUST_24544_PI390587928	ABC04477 ABC04478 ABC04479
AK249008.1	1480	7e-82	958 - 1237	87	247 / 284	CUST_29135_PI390587928	ABC04477 ABC04478 ABC04479 ABC12510
MLOC_39656.1	888	0.0	3 - 848	87	757 / 870	None	ABC04477 ABC04478 ABC04479
MLOC_72579.1	1443	0.0	212 - 1240	81	858 / 1059	CUST_29133_PI390587928	ABC04477 ABC04478 ABC04479 ABC12510
MLOC_39656.2	894	0.0	1 - 658	88	595 / 679	None	ABC04477 ABC04478 ABC04479
MLOC_72579.2	1178	1e-173	22 - 940	80	757 / 949	None	ABC04477 ABC04478 ABC04479 ABC12510