barSeed - Barley Seed Development Database

Probe ABC12367

Source Contig ABC12367

barSeed

Links

Affymetrix Source Sequence (1026 bp)

>ABC12367 1026
GTCTTGTTTCCCCTTCCCCGTGTCGTCCCTGCAAGACCTCTGTCTGCTTGGCGTGGAGGG
CATGGAGACGCTGGCTCCCCTCTCAAATCTCATCTCTCTCACCAGTTTAACCGTCCGTAG
ATGTGGGGATCTAAGAGGCGAGGGCTTATGGCCTCTCGTCGCCGGGGGCCGCCTCACACG
ATTAGGCATCTTTGGAACCCGAAAATTCTTCACTGGTTCTGAGCCCTCACGGCTGCATGA
CCAACAGATTCCTTCCTCTTCATCCAAACTCGAACATCTCACTACAGATGACTTGACGGG
AGTCCTTACTGCGCCCATCTGCAGACTCCTCTCTTCCTCCCTTACCAGATTAACCTTTTT
GAACATCCAAGAGGTGGAGCGCTTCACAGAGGAGCACGAGGAGGCCCTTCACCTCCTCAA
TTCTCTCCAGAAACTCGTTTTTTGGAATTGTAGGAAGCTGCAGCGCCTCCCTGCAGGGTT
AGCCCAGCTTGCCAGCCTCAAGATATTACGGATTTGGAAGTTTCCAGCCATCAGGTTGCT
GCCCAAGGACGGACTGCCAAGTTCTCTGCAAGAACTAGATATCAAAGACTGTCCTGCCAT
CAAATCTCTGCCCAAGGACGGCCTGCCAAGTTCACTACGGAAATTAGAAGTTTGTGGTGG
CATCAGCGAGGAGCTTAAAAGGCAGTGCTGCAAGTTAAAAGGAACCATTCCAATAATCAT
AGACTACTAAGGCTAATCCAAGAGGTCTTCTTGGATTTGTACATTCTTCTAGCCTAGCCT
TGTTGATCCAGTTCTCTCTCTATCCAAGAACACAAGGTCCCAGACTATAGAATCCATCCA
TTACTAAACTGGCCTCTGGCATGAAGTTGTTGAAGTGCTGTTATCCTTGAAGTTTTTTGC
ATACACGAGCAGTTCGGATGCCATGGCCTTGGGTGGTATCTCCTACATAAATATGGGATC
TGTCTTGGACTTGCACATTCTTATGGACCTTGGAGATCTCTCATCTTCTAGTCGCAAAAA
CAGAAG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355483	2425	0.0	1400 - 2424	99	1023 / 1025	CUST_30962_PI390587928	ABC12367
MLOC_4500.2	6029	0.0	20 - 985	98	947 / 970	CUST_14485_PI390587928 CUST_30281_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_4500.3	3716	0.0	15 - 980	98	947 / 970	CUST_30281_PI390587928 CUST_14485_PI390587928	ABC12367
MLOC_4500.1	6161	0.0	163 - 1117	98	936 / 959	CUST_30281_PI390587928 CUST_14485_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_4500.4	3939	0.0	1 - 741	97	722 / 745	CUST_14485_PI390587928 CUST_30281_PI390587928	ABC12367
MLOC_50140.2	7985	0.0	7068 - 7900	91	765 / 840	CUST_2756_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_50140.3	5523	0.0	4483 - 5315	91	765 / 840	CUST_2756_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_50140.1	8124	0.0	7176 - 8008	91	765 / 840	CUST_2756_PI390587928	ABC12367 ABC14071 ABC17631
AK250606.1	2288	1e-83	442 - 616	99	174 / 176	CUST_30963_PI390587928 CUST_30962_PI390587928	ABC12367 ABC35010