barSeed - Barley Seed Development Database

Probe ABC14071

Source Contig ABC14071

barSeed

Links

Affymetrix Source Sequence (864 bp)

>ABC14071 864
GTCTCTGCACATCCACCAGCTCTGGCATCTGCTAGCAAAAAAGTAAGCTTCACATTTTCC
TCGCAAGCAACATAGAGAAAGAAGAAAAGAAGACCACTCTGCACTCCTCCATCGAAGCTC
GTCGCCTTGGTGGCAAGAGTTTCGTATCAGTAATTCAGCATGCACATCTTTCCTCAAGTT
TATGCTTCTTCAGGCTAGTCCTCCTCTTGCAACAAACAATTGACATCACCTCTACTTACT
GCAGGTGACTTATTAACTGCATCTGCACCACCATGGACTTCGCCGTGGACGCGGCGCTGT
GGGTGGTGGGCAAGGCGCTGGCCCCCGTCACGGGCGGCCTGCTGGAGTCATGGGCAGCCA
GCACCGAGCTTGGCCGCAACATCGACGCCCTCAAGATGCAACTGCTGTACGCACAAGGGA
TGTTGGACAACGCGCAGGGTAGGGACATCCGCAGCCCTGCTCTCAAGGAGCTTCTGCACA
AGCTGCGGGAGCTGGCGTACGGTGCCGACGACGCGCTCGACGAGCTCGACTACTTCCGCA
TCCAGGACGAGCTCGATGGCACATACCATGCCGCCGATTTGGATGCCCAGAACTGCGTTG
ACAGGCTAGCCATCAACGCTCGGCACACTGCCAAGGCTGCAGGCATTAAACTTAAGTGCT
CGTCATCCTCTACCCGTGCTGATCCCGACGATCAGAAAGATGGTGGCACACGAGTATGCC
TCTCTGTCGTTGGCTCGTGTGGTGGGCATGATATCAGCTCATCACCACCGCTACGCACCA
CCCAGGGAGTCCAAGAGGCTGATGGCGGATGCATGCCTAATGTCGTCTCTTGTGCTCGCA
GCGCTGCAAAAACAATGGGTAAAC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_4500.1	6161	2e-55	5006 - 5141	96	131 / 137	CUST_30281_PI390587928 CUST_14485_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_4500.2	6029	2e-55	4874 - 5009	96	131 / 137	CUST_14485_PI390587928 CUST_30281_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_50140.2	7985	1e-102	3327 - 3628	89	269 / 302	CUST_2756_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_50140.3	5523	1e-102	742 - 1043	89	269 / 302	CUST_2756_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_50140.1	8124	1e-102	3435 - 3736	89	269 / 302	CUST_2756_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_5583.1	4977	7e-55	834 - 1139	80	245 / 308	None	ABC14071
MLOC_5583.2	4927	7e-55	758 - 1063	80	245 / 308	None	ABC14071
MLOC_5583.3	4813	7e-55	644 - 949	80	245 / 308	None	ABC14071