barSeed - Barley Seed Development Database

Probe ABC17631

Source Contig ABC17631

barSeed

Links

Affymetrix Source Sequence (709 bp)

>ABC17631 709
CAGCTCCCATCGAATTCTGTTGCAGCTCGATCGTCATCGTCTTCGCAGCTGGGAGCCGCG
CCGGTTTCACATTCGTGAGTACTGGGGTTGCGATGGACTTCGCCGTGGACGCTGCGCTGT
GGGCGGTGGGCAAGGCGCTCGCCCCCGTCAAGGACGGCCTGTTGGAGTCATGGGCAGCCA
GCACTGAGCTTGGCCGCAACATCGATGCCCTCAAGATGCAGCTGCTCTATGCGCAAGGGA
TGCTCGACAGTGCACAAGGCAAGGACATCCGCAGCACCGCACTCAAGGAGCTTCTGCACA
AGCTGCGGGAGCTGGCGTACAACACCGACGACGTGCTCGACGAGCTGGAGTACTTCCGCA
TCCAGGACGCACTCGATGACACATACCATGCCGCTGCTGACGTGAGTACGCAGGGCGGCT
TCATCGGCGGGCTCGTCCTCAATGCTCGTCACACCGCCTACGCCGTTGGTAAACATTTTT
CATGTCACTCTGCCCCGTCCGTCCAGGATGACAACGCTCATACCGTCATGTTGGAAGAGG
AATCTCCCAATACGGCAGGAAGTGGACGGCGATTCTTCTGTGGTGCCTGGTCGTCCAAGG
CACGGCAGAGAAACCAAGCCGTGCAAACACCAAAATTAAAGTTTGATAGGGTGGAAATGT
CCAGAAAGATGGTGGAAATAGTAGCCCAGCTGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_50140.2	7985	0.0	3238 - 3929	99	689 / 692	CUST_2756_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_50140.3	5523	0.0	660 - 1344	99	682 / 692	CUST_2756_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_50140.1	8124	0.0	3424 - 4037	99	613 / 614	CUST_2756_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_4500.1	6161	9e-98	4676 - 4977	88	266 / 302	CUST_30281_PI390587928 CUST_14485_PI390587928	ABC12367 ABC14071 ABC17631
MLOC_4500.2	6029	9e-98	4544 - 4845	88	266 / 302	CUST_14485_PI390587928 CUST_30281_PI390587928	ABC12367 ABC14071 ABC17631