barSeed - Barley Seed Development Database

Probe ABC35010

Source Contig ABC35010

barSeed

Links

Affymetrix Source Sequence (542 bp)

>ABC35010 542
AGTTTTTTGCATACACGAGCAGTTCGGATGCCATGGCCTTGGGTGGTATCTCCTACATAA
ATATGAGAGGGAGGAGTACAAGGGCAGGTCTGAAGGTATAGCTCCCCTTTTGTGCTGGAT
TGAAAATTTAGAGTGGGAGAAATACAGGGGCATGTCTGAAGGTATAGCTTTGCTTTGTGA
TGGTTTATTGAACTCAGCACCCTGCACTGTGGTATAGTGGGGTTAATACAGATAAATCTC
CTAGGAAGAGAAGTGTTGGCCCAAGCTTTGTTTGGTTCAAGCAGTCTTCTGCCACTGCAA
CAGCCACATGAATAAGTAGTATCCATGAATGCAGGTTCATTGTTCCAAACACTTCTGCTC
TGATGCCAGAATTATTCTTGATCTGTAAGCTGCAGTGAACCAAACTCTTCTTCACCTTAG
ACTAGTTGACTCATCAACCAGGAACTGCGGCGCTGAATAGCCAATCGGGCCAATCCCGTT
CACTTTCACACGATGTAACATGGAAGCACACACAAAAAGGAAAAGAAAAAAAAAAAAAAA
GG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250606.1	2288	0.0	1195 - 1637	96	429 / 449	CUST_30962_PI390587928 CUST_30963_PI390587928	ABC12367 ABC35010
MLOC_77890.9	1389	0.0	325 - 756	94	420 / 447	CUST_30963_PI390587928 CUST_30279_PI390587928	ABC35010
MLOC_77890.3	876	0.0	327 - 744	94	406 / 433	CUST_30279_PI390587928	ABC35010
MLOC_77890.4	1534	5e-179	327 - 753	93	415 / 447	CUST_30963_PI390587928 CUST_30279_PI390587928	ABC35010
MLOC_77890.8	1384	5e-179	325 - 751	93	415 / 447	CUST_30279_PI390587928 CUST_30963_PI390587928	ABC35010
MLOC_77890.7	1529	5e-179	325 - 751	93	415 / 447	CUST_30279_PI390587928 CUST_30963_PI390587928	ABC35010
MLOC_77890.2	1366	2e-173	327 - 757	92	415 / 451	CUST_30963_PI390587928 CUST_30279_PI390587928	ABC35010
MLOC_77890.11	845	3e-171	282 - 694	93	401 / 433	CUST_30279_PI390587928	ABC35010
MLOC_77890.6	1482	1e-61	327 - 491	92	159 / 172	CUST_30963_PI390587928 CUST_30279_PI390587928	ABC35010
MLOC_77890.1	1480	1e-61	328 - 492	92	159 / 172	CUST_30279_PI390587928 CUST_30963_PI390587928	ABC35010
MLOC_77890.5	1480	1e-61	327 - 491	92	159 / 172	CUST_30963_PI390587928 CUST_30279_PI390587928	ABC35010
MLOC_77890.10	976	1e-61	325 - 489	92	159 / 172	CUST_30279_PI390587928	ABC35010