barSeed - Barley Seed Development Database

Probe ABC03369

Source Contig ABC03369

barSeed

Links

Affymetrix Source Sequence (1119 bp)

>ABC03369 1119
GCATGCTTGCAAAAGCTATTCAAAAATGATCATATATGTTGAAGCGTGCGAAAGTGGCAG
CATCTTTGAGGGTTCGATGCCACAGGATCATACTATTTATGTTACAACGGCAGCAAATGC
GCAAGAAAATAGCTGGGCAGCATACTGCCCTACTATGGAAATTCCACCTCCTCCTGAATA
TGATACCTGTTTAGGTGATGCATACAGTGTTTCATGGATGGAAGACAGTGAAACTCATGA
TCTAAATAAGGAAAGCATCAAGCATGCGTACGAGGTGGTTATTGAGAGAACGGCACCCCT
CTCTCATGTCATGGAGTATGGTGACAAGACATTCAAGGAGGACATGCTTTTCCTCTTTCA
AGGTTTCGATCCTGCAAAGTCAAGCATCAGAAACAGGCCGCTGCCTATGCCCAGCCTCAA
GGGTGCAATCAATCAACGAGATGCCGATATTCTCTTCATGTGGAGGAAGTATGAGAAGTT
AAATGGGGGGTCGGAAGAGAAGCAGAGGGCTCTCAGGGAGATCAAAGAAACTGTGCTACA
CAGGAAGCATCTGGACAGCAGTATCGATTTCATCGGGAAGCTTGTCTTTGGAATGGACAA
GGGGCCTTCGATGCTCGAGGCTGCTAGAGGCTCTGGCCAGCCACTGGTAGACGATTGGGA
TTGTCTGAAGAGGATGGTTCGAGTGTTCGAGTCCCAGTGCGGATCACTCACTCAGTACGG
CATGAGGCACATGAGGGCGTTCGCAAACATCTGCAACAATGGCGTCTCCGAGGCCGAGAT
GAAGGAGGCGAGCATCAGCGCTTGCGACGGCTACGACATGGGGAAGTGGAACCCTCTGGT
TTTAGGGCACAGCGCTTGATCCGTTGCACTGCAGTACATGGGAGCAGTACCAAATGCTCC
AGAGGCTCCTAGCTAGGCCTCATATATGGTGTACATACATACACTGGTATAGATACCTCT
ACAAGAAAGCACCCAACAATGACGCCCCATGTGTATTGGGTTAATCAGTAGCTTATGATC
GTGGTCGTGCCTTTGTAAACTAAGTTTGACTGCAATCAATTGAAAGGCAATGATTTTTAT
GTAGCAAGAGCATGTGAATGTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_40573.1	1225	0.0	220 - 1225	98	991 / 1007	None	ABC03366 ABC03369 ABC03371 ABC03372 ABC52841
MLOC_5275.1	853	0.0	22 - 736	91	657 / 722	None	ABC03366 ABC03369 ABC03371 ABC03372
AK374437	618	0.0	2 - 618	94	579 / 617	None	ABC03366 ABC03369 ABC03371 ABC03372 ABC52841
MLOC_57439.1	1314	0.0	660 - 1314	92	609 / 661	CUST_23965_PI390587928	ABC03366 ABC03369 ABC03371 ABC03372 ABC52841
AK357911	2028	0.0	961 - 2020	82	899 / 1096	CUST_22576_PI390587928	ABC03366 ABC03369 ABC03371 ABC03372
MLOC_64395.3	2219	0.0	2 - 1024	82	863 / 1048	CUST_22576_PI390587928	ABC03366 ABC03369 ABC03371 ABC03372
MLOC_57439.3	595	0.0	1 - 516	93	479 / 516	None	ABC03366 ABC03369 ABC03371 ABC03372 ABC52841
MLOC_64395.2	2213	0.0	24 - 763	84	646 / 771	CUST_22576_PI390587928	ABC03366 ABC03369 ABC03371 ABC03372
MLOC_64395.1	1579	0.0	24 - 763	84	646 / 771	CUST_22576_PI390587928	ABC03366 ABC03369 ABC03371 ABC03372
MLOC_57439.2	1282	7e-86	987 - 1203	93	204 / 219	CUST_23965_PI390587928	ABC03366 ABC03369 ABC03371 ABC03372 ABC52841
MLOC_598.1	709	2e-66	528 - 707	92	166 / 180	CUST_23966_PI390587928	ABC03366 ABC03369 ABC03372