barSeed - Barley Seed Development Database

Probe ABC03216

Source Contig ABC03216

barSeed

Links

Affymetrix Source Sequence (643 bp)

>ABC03216 643
GTACGTCGTCGTCTCGGGTGAAGGTGGAGCAGAGCAGATCGATGGCGCTCTCTCGTCGTC
GCATGGCGGCGTCCGTCCTCCTCGTGCTGGTCCTCCTCGTCGCCACAGAGATGGGGGCGA
CGAGGGTGAAGATGGCGGGGGCGCGGGATTGCGTGTCGCAGAGCCACAATTTCAAGGGTG
CATGCCTCAGCAGCAGCAACTGCGCCGCCGTCTGCCGCACCGAAAACTTCCCCGGCGGCG
AGTGCCACACGCCGCACGTCGAGCGCAAGTGCTTCTGCAAGAGGCCCTGCTAGTCCGTCC
CGCCGGCCAGCGCCGAGACGTCCGATCGACGCGTCCACGTTCGTCGTCACAGTTCTTACC
TAGAGCTAGCATCCGTGCCGTTAACTAGCTATGTTCTGTTCGTCGGTGTGTTCTGCTTAG
TGGAACTCTCATAATAAAGTAGAAAACCAATCGGGGTCTCGGTAGTTTACTTGGCTGTAC
GTCGTGTTTGTGCCTGATTTGTGTGTGGTGGTGTTATAAATATGGTGGCGTTATATCAGC
ATGGTGTGCAATGCATCTACCTCTCTACCCCTCTCTCTCTATATATATGTGTAAGTGTGA
TCATTTTCAAAGAGACTATTATTGTGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10766.1	868	0.0	8 - 634	100	627 / 627	CUST_21012_PI390587928	ABC03214 ABC03215 ABC03216 ABC03217
MLOC_10766.2	632	0.0	1 - 549	100	549 / 549	None	ABC03214 ABC03215 ABC03216 ABC03217
MLOC_60968.2	984	9e-83	168 - 435	87	237 / 271	None	ABC03214 ABC03215 ABC03216 ABC03217 ABC06933
AK250623.1	752	4e-61	271 - 458	89	168 / 188	CUST_29260_PI390587928 CUST_17198_PI390587928 CUST_21011_PI390587928 CUST_21037_PI390587928	ABC03214 ABC03215 ABC03216 ABC03217 ABC06933 ABC38880
MLOC_60968.1	1052	4e-61	334 - 521	89	168 / 188	CUST_29260_PI390587928 CUST_17198_PI390587928 CUST_21011_PI390587928 CUST_21037_PI390587928	ABC03214 ABC03215 ABC03216 ABC03217 ABC06933 ABC38880