barSeed - Barley Seed Development Database

Probe ABC02387

Source Contig ABC02387

barSeed

Links

Affymetrix Source Sequence (847 bp)

>ABC02387 847
GTGCTGGGGAGGATGTGGCGCGAGATCTTCGGCGGCCGCGAGGACTACGATAAGCGCCTG
TAGTACCTGTCCAAGGAGCAGGCCGTCGTGCACGGGCGGATGCGCCGCCGGACCCAGTTC
TCGCGCCGCACCGTCAGCAGTTTCGTCCTCTTCCCCCTCCTCCGGCTCCGGCTCCAGCGA
CAAGGGGGGCGGCGCGCTGACCTTCCAGCAGGCCATCCAGCGGATGCAGGAGTATTGGGC
CTCCGTCGGATGCGCCATCATGAAGTGCAGCAAGACCAAATCACCACCCTTTTCCTCTCT
TCTACTCCTACTTGTATCCGCCAACTATGTAGAATCACCAGCAGCAGCATCAATCAATGG
CTGATAGATGTAATGACAGTTCTTGATTTTCCTAATCAATCCATCGAGCAGGTCGGCGCC
GGGACGATGAACCCCCTCACCTTCATCCGAGTGCTGGGCCGTTAGCCGTGGAACGTCGTC
TATGTGGAGCTGAGCGTGAGGCCCGACGACAACCCCTACGGCGACAACCCCAACAGGCTC
CAGCGCCACACCCAGTTCCAGGTGATTCTGAAGGCTGACCGGGTAACTCGCAGTCGCAGG
ACCTCTTCCTGCACAGCCTTTCAGCGTTAGGCATCAATGTTCGTGAACACGACTTCCGTT
TCGTCGAGGACAACTGGGAAAGTCCTGTAAAGTTCAAGCATATATATAAACCAGTAGCAT
AGCACAATCACAACTAAGCTCTTGTTAATAGTTAGCAGTATTACACTCCTTTAAATTAGT
GGTCACCACAAGACCTACTATTTTCCATATGTTGAGAAAAATAATCTTCTCCCAAAAAAA
AAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK372814	3841	0.0	1997 - 2830	100	834 / 834	CUST_38825_PI390587928 CUST_12396_PI390587928 CUST_27689_PI390587928 CUST_38826_PI390587928	ABC02387 ABC02395 ABC07309 ABC07310 ABC47834
MLOC_35411.2	1272	0.0	302 - 1135	99	833 / 834	CUST_12396_PI390587928 CUST_27689_PI390587928	ABC02387 ABC02395 ABC06493 ABC47834
AK367370	2529	2e-104	975 - 1180	100	206 / 206	CUST_27689_PI390587928 CUST_12396_PI390587928	ABC02387 ABC02395 ABC47834
MLOC_35411.1	1407	2e-104	302 - 507	100	206 / 206	CUST_12396_PI390587928 CUST_27689_PI390587928	ABC02387 ABC02395 ABC06493 ABC47834
MLOC_35411.3	1322	2e-104	301 - 506	100	206 / 206	CUST_12396_PI390587928 CUST_27689_PI390587928	ABC02387 ABC02395 ABC06493 ABC47834
MLOC_35411.4	816	0.0	201 - 679	99	478 / 479	None	ABC02387 ABC02395 ABC06493 ABC47834
MLOC_35410.1	440	5e-156	2 - 303	99	301 / 302	None	ABC02387 ABC06493
MLOC_63502.4	1208	3e-113	821 - 1087	94	253 / 268	CUST_28105_PI390587928	ABC02387 ABC02395 ABC47834
MLOC_63502.6	905	3e-113	550 - 816	94	253 / 268	None	ABC02387 ABC02395 ABC47834
MLOC_63502.1	995	3e-113	642 - 908	94	253 / 268	CUST_28105_PI390587928	ABC02387 ABC02395 ABC47834
MLOC_63502.5	832	3e-113	477 - 743	94	253 / 268	CUST_28105_PI390587928	ABC02387 ABC02395 ABC47834
MLOC_63502.3	1115	3e-113	733 - 999	94	253 / 268	None	ABC02387 ABC02395 ABC47834
MLOC_63502.2	1176	3e-113	823 - 1089	94	253 / 268	CUST_28105_PI390587928	ABC02387 ABC02395 ABC47834
MLOC_77683.1	1125	1e-96	498 - 771	90	252 / 280	CUST_33320_PI390587928	ABC02387 ABC47834
MLOC_77683.2	1137	1e-96	510 - 783	90	252 / 280	CUST_33320_PI390587928	ABC02387 ABC47834
MLOC_77683.3	1088	1e-96	456 - 729	90	252 / 280	CUST_33320_PI390587928	ABC02387 ABC47834
MLOC_77683.4	1076	1e-96	444 - 717	90	252 / 280	CUST_33320_PI390587928	ABC02387 ABC47834