barSeed - Barley Seed Development Database

Probe ABC01235

Source Contig ABC01235

barSeed

Links

Affymetrix Source Sequence (564 bp)

>ABC01235 564
AGAGGAACGCCAGGGACTCCCACGTTCCCATCCTCGCCCCGCTGCCCATCAGGTTCGACG
AGTTCCTGGTCCACCTGGCCACCATCCGCATCACCGGTGCCGGCATCAACCCGACGAGGA
GCCTGGGCGCGGCCTTCATCTACAACATGGAACACTGCCTGGTCACACCACAGGATCTTC
TGGGTCGGCCGCTTCGTCGGCGCCGCTCTGGCCGCCATCTACCACCAAGAGGTCATAAGA
GCGATCCCATTCCAGACCAAGTCCTAAGCTGCTGCTACAAAGAAAGATGCCATCCCAACC
CGAAGAGCAAACTGCGTGTTCTGAGTGAATTTCTTTCTGATGGGGGCGGCCCTCTCTTCC
CATCGTCCCTGTTACCGTGGAATTCCAATTTGTCTTCCAAGTTTGATGTACTACTCTTGC
TCTTGCTCTGTATTCACCTGAACCCAGACAGAGGACTTGTATGTAATCTCATCAGTGCTC
AGTTGTTGTGTAGTACTGCTCGTTGTTGTGCAAATCCAGCAAAGTTGTTCCAAGTAGTGC
CCTCTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_80094.1	1170	0.0	692 - 1170	95	457 / 480	CUST_30465_PI390587928 CUST_36527_PI390587928 CUST_20150_PI390587928	ABC01216 ABC01219 ABC01222 ABC01223 ABC01225 ABC01226 ABC01228 ABC01230 ABC01235 ABC01237 ABC01242 ABC19393 ABC31055 ABC47730
MLOC_80094.2	1506	0.0	32 - 459	95	406 / 429	CUST_30465_PI390587928 CUST_36527_PI390587928 CUST_20150_PI390587928	ABC01216 ABC01219 ABC01222 ABC01223 ABC01225 ABC01226 ABC01228 ABC01230 ABC01235 ABC01237 ABC01242 ABC19393 ABC47730