- Probe ABC00411
- Source Contig ABC00411
Affymetrix Source Sequence (1860 bp)
>ABC00411 1860 GGCAAACTGCCCGATCTCCTCCACTTCTCCCCTCCTCTCTCATCGCCCCCTTTTATCTCC CGATCTCACACATTTTGGGAAGGGAGAGAGAAGCAGAGGAGGCCATTCTTTACACCCAAG AAAGCCCGGAAGAGAAGGCGAGGGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGACGAGAT GAGGGAGATCATCAGCATCCACATCGGCCAGGCCGGGATCCAGGTCGGCAACGCTTGCTG GGAGCTCTACTGCCTCGAGCACGGCATCAATCAGGATGGCACCATGCCCAGTGACACCAC GGTTGGGGTTGCACACGATGCGTTCAACACGTTCTTCAGTGAGACCGGTGCGGGCAAGCA CGTGCCGAGGGCCATCTTCGTCGACCTTGAGCCCACTGTCATCGATGAGGTGCGCACCGG TGCCTACCGCCAGCTCTTCCACCCGGAGCAGCTCATCTCTGGGAAGGAGGATGCCGCCAA CAACTTCGCCCGTGGCCACTACACTGTTGGAAAGGAGATCGTAGATCTATGTCTGGATCG TGTACGCAAATTGGCAGACAATTGCACCGGGCTGCAGGGATTCTTGGTGTTCAATGCTGT CGGTGGTGGAACTGGATCAGGACTGGGTTCTCTGTTGTTGGAGCGCCTCTCGGTTGATTA TGGCAAGAAATCTAAGCTTGGATTCACCATTTACCCTTCCCCACAGGTCTCAACAGCTGT TGTAGAACCATACAACAGTGTCCTCTCCACTCACTCTTTGCTTGAGCACACCGACGTTGC GGTCCTCCTAGATAACGAGGCTATCTATGACATATGCCGGAGGTCTCTTGACATTGAGAG GCCAACCTACACCAACTTGAACAGGCTGATATCACAGATCATATCTTCTCTTACCACCTC CCTGAGGTTTGATGGTGCCATCAATGTGGATGTCACAGAGTTCCAGACCAACCTTGTCCC TTACCCACGTATCCATTTCATGCTTTCGTCGTATGCCCCTGTTATCTCTGCCGAGAAGGC TTACCATGAGCAGCTCTCTGTGCCTGAAATCACCAATGCTGTCTTTGAGCCCTCAAGCAT GATGGCCAAGTGTGACCCTAGGCATGGAAAATATATGGCCTGCTGCTTGATGTACCGTGG TGATGTTGTTCCCAAGGATGTCAATGCCGCGGTAGCAACCATCAAAACCAAGAGAACTGT CCAGTTCGTCGACTGGTGCCCTACCGGGTTCAAGTGTGGCATCAACTACCAGCCACCTTC CGTCGTCCCCGGAGGTGACCTGGCAAAGGTTCAGCGCGCCGTGTGCATGATCAGCAACAA CACCGCTGTCGCCGAAGTGTTCTCGCGCATCGACCACAAGTTCGACTTGATGTACGCCAA GCGTGCGTTCGTGCACTGGTACGTCGGCGAGGGAATGGAGGAAGGTGAGTTCTCGGAGGC TCGTGAGGACTTGGCCGCCCTCGAGAAGGACTACGAGGAAGTTGGCGCCGAAGGCGCGGA CGACGAGGGCGACGAGGGCGATGACTACTAAGTAGCTGGTTAATAAGGTAGTTGGCTGGT TAATGATTGGCTTTGATCTGTATACTCGGTAATTTGGTTCCGTTGCGTTACATATTGATT GCTGTTATGCGTGTTTCCTTTCCTGTAATGTACTGAAGATGTTGTTAGGGTGGCCATGAT TGTTGATACCCCATTTCCACATTTTGGCTTTCGATGCTACTCGTCCCGAGTTTGGTGTGC ATGCGCCATTCTGAGCCGATCTGCAAATATTTGTATGCTCTCTAATGTACTGTGCCATGT TAGTACCACGGAGGTTTCTGTTTAAAAAAAAAAAACTGAGTGCAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_11751.1 | 1952 | 0.0 | 22 - 1844 | 100 | 1823 / 1823 | CUST_36483_PI390587928 CUST_613_PI390587928 CUST_36484_PI390587928 | ABC00127 ABC00411 ABC00930 ABC50944 |
| MLOC_69930.1 | 2090 | 0.0 | 121 - 1479 | 81 | 1107 / 1364 | CUST_20826_PI390587928 CUST_614_PI390587928 CUST_22480_PI390587928 | ABC00127 ABC00169 ABC00333 ABC00411 ABC00803 ABC00902 ABC50944 |
| AK357138 | 1787 | 0.0 | 106 - 1464 | 81 | 1104 / 1364 | CUST_612_PI390587928 CUST_40096_PI390587928 | ABC00169 ABC00411 ABC00902 ABC00930 |
| MLOC_60297.1 | 2086 | 0.0 | 559 - 1917 | 81 | 1104 / 1364 | None | ABC00169 ABC00411 ABC00902 ABC00930 |
| MLOC_69930.2 | 1479 | 0.0 | 117 - 1333 | 81 | 992 / 1221 | CUST_22480_PI390587928 CUST_20826_PI390587928 CUST_614_PI390587928 | ABC00127 ABC00169 ABC00333 ABC00411 ABC00803 ABC00902 ABC50944 |
| AK372321 | 1636 | 0.0 | 158 - 1412 | 77 | 969 / 1265 | None | ABC00411 |