Probe CUST_986_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_986_PI426222305 | JHI_St_60k_v1 | DMT400052202 | CAAATTGAGAGACATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAG |
All Microarray Probes Designed to Gene DMG400020246
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_986_PI426222305 | JHI_St_60k_v1 | DMT400052202 | CAAATTGAGAGACATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAG |
| CUST_1152_PI426222305 | JHI_St_60k_v1 | DMT400052200 | AATGAAAAATTCCTCAGTCCCTTCCTTCTCCTAACGTTTCCTTTTTTCCGTATAGTCTGC |
| CUST_1270_PI426222305 | JHI_St_60k_v1 | DMT400052201 | CAAATTGAGAGACATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAG |
Microarray Signals from CUST_986_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 46.2578 | 8.60168 | 0.729855 | 0.105715 |
| ABA 1h | 65.2196 | 13.8921 | 1.16018 | 0.158475 |
| ACC 1h | 34.2202 | 12.6573 | 0.441189 | 0.224667 |
| BABA 1h | 52.999 | 6.62178 | 0.886872 | 0.0821403 |
| Chitin 1h | 17.7312 | 3.60468 | 0.320227 | 0.0684151 |
| Epi 1h | 31.5892 | 3.81341 | 0.595691 | 0.0721962 |
| SA 1h | 46.9607 | 11.5276 | 0.707049 | 0.15623 |
| Me-JA 1h | 13.3858 | 3.70065 | 0.249323 | 0.0784133 |
| Control 6h | 141.376 | 36.5153 | 2.17653 | 0.462457 |
| ABA 6h | 241.108 | 57.5825 | 3.48103 | 0.858018 |
| ACC 6h | 153.606 | 32.9367 | 2.08181 | 0.337082 |
| BABA 6h | 113.646 | 25.6617 | 1.56376 | 0.36622 |
| Chitin 6h | 109.01 | 26.7245 | 1.58946 | 0.341335 |
| Epi 6h | 117.119 | 22.993 | 1.64346 | 0.290026 |
| SA 6h | 86.323 | 20.6825 | 1.35952 | 0.27345 |
| Me-JA 6h | 80.2224 | 18.4993 | 1.23785 | 0.239299 |
Source Transcript PGSC0003DMT400052202 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g094300.2 | +2 | 0.0 | 657 | 336/341 (99%) | genomic_reference:SL2.50ch02 gene_region:49450155-49452911 transcript_region:SL2.50ch02:49450155..49452911+ go_terms:GO:0008152 functional_description:Uridylyltransferase PII (AHRD V1 *--- C7JBQ7_ACEP3); contains Interpro domain(s) IPR002912 Amino acid-binding ACT |
| TAIR PP10 | AT3G01990.1 | +2 | 0.0 | 538 | 294/436 (67%) | ACT domain repeat 6 | chr3:330256-332066 FORWARD LENGTH=433 |