Probe CUST_1270_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1270_PI426222305 | JHI_St_60k_v1 | DMT400052201 | CAAATTGAGAGACATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAG |
All Microarray Probes Designed to Gene DMG400020246
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_986_PI426222305 | JHI_St_60k_v1 | DMT400052202 | CAAATTGAGAGACATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAG |
| CUST_1152_PI426222305 | JHI_St_60k_v1 | DMT400052200 | AATGAAAAATTCCTCAGTCCCTTCCTTCTCCTAACGTTTCCTTTTTTCCGTATAGTCTGC |
| CUST_1270_PI426222305 | JHI_St_60k_v1 | DMT400052201 | CAAATTGAGAGACATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAG |
Microarray Signals from CUST_1270_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 59.381 | 8.39241 | 0.91141 | 0.0783686 |
| ABA 1h | 57.4592 | 8.84871 | 0.989744 | 0.100157 |
| ACC 1h | 32.4702 | 14.6729 | 0.362103 | 0.252863 |
| BABA 1h | 39.606 | 15.7345 | 0.475973 | 0.312552 |
| Chitin 1h | 28.8916 | 3.93244 | 0.497949 | 0.0738736 |
| Epi 1h | 33.175 | 5.95227 | 0.577872 | 0.104976 |
| SA 1h | 40.0992 | 10.9482 | 0.552553 | 0.203973 |
| Me-JA 1h | 17.2918 | 3.87476 | 0.328725 | 0.0733751 |
| Control 6h | 134.735 | 43.9524 | 1.88851 | 0.529419 |
| ABA 6h | 243.082 | 63.1014 | 3.27804 | 0.949681 |
| ACC 6h | 155.416 | 33.0922 | 2.01086 | 0.304432 |
| BABA 6h | 100.108 | 19.5541 | 1.3359 | 0.252443 |
| Chitin 6h | 109.384 | 25.3392 | 1.52177 | 0.344134 |
| Epi 6h | 121.266 | 25.5572 | 1.61511 | 0.337367 |
| SA 6h | 80.0329 | 19.2563 | 1.19093 | 0.189437 |
| Me-JA 6h | 87.4567 | 20.7966 | 1.27992 | 0.260831 |
Source Transcript PGSC0003DMT400052201 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g094300.2 | +2 | 0.0 | 651 | 336/346 (97%) | genomic_reference:SL2.50ch02 gene_region:49450155-49452911 transcript_region:SL2.50ch02:49450155..49452911+ go_terms:GO:0008152 functional_description:Uridylyltransferase PII (AHRD V1 *--- C7JBQ7_ACEP3); contains Interpro domain(s) IPR002912 Amino acid-binding ACT |
| TAIR PP10 | AT3G01990.1 | +2 | 0.0 | 533 | 293/440 (67%) | ACT domain repeat 6 | chr3:330256-332066 FORWARD LENGTH=433 |