Probe CUST_1152_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1152_PI426222305 | JHI_St_60k_v1 | DMT400052200 | AATGAAAAATTCCTCAGTCCCTTCCTTCTCCTAACGTTTCCTTTTTTCCGTATAGTCTGC |
All Microarray Probes Designed to Gene DMG400020246
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_986_PI426222305 | JHI_St_60k_v1 | DMT400052202 | CAAATTGAGAGACATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAG |
| CUST_1152_PI426222305 | JHI_St_60k_v1 | DMT400052200 | AATGAAAAATTCCTCAGTCCCTTCCTTCTCCTAACGTTTCCTTTTTTCCGTATAGTCTGC |
| CUST_1270_PI426222305 | JHI_St_60k_v1 | DMT400052201 | CAAATTGAGAGACATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAG |
Microarray Signals from CUST_1152_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 22.0384 | 3.62832 | 0.673794 | 0.11419 |
| ABA 1h | 42.0363 | 11.2066 | 1.38575 | 0.260042 |
| ACC 1h | 22.3298 | 4.53194 | 0.644077 | 0.167883 |
| BABA 1h | 24.7318 | 9.38058 | 0.616664 | 0.347677 |
| Chitin 1h | 20.6714 | 3.58081 | 0.704959 | 0.123222 |
| Epi 1h | 26.7089 | 3.89337 | 0.940455 | 0.155739 |
| SA 1h | 37.1017 | 5.08079 | 1.10046 | 0.125766 |
| Me-JA 1h | 16.7931 | 6.31444 | 0.562854 | 0.168062 |
| Control 6h | 47.5231 | 13.3308 | 1.37367 | 0.330551 |
| ABA 6h | 77.8488 | 7.47646 | 2.25609 | 0.168927 |
| ACC 6h | 50.9622 | 10.7319 | 1.32597 | 0.133611 |
| BABA 6h | 41.8345 | 4.62281 | 1.15963 | 0.129236 |
| Chitin 6h | 38.1411 | 4.49667 | 1.10279 | 0.138708 |
| Epi 6h | 57.0225 | 9.41514 | 1.52545 | 0.167544 |
| SA 6h | 33.0365 | 4.24686 | 1.02726 | 0.238817 |
| Me-JA 6h | 19.5933 | 3.70489 | 0.611752 | 0.115804 |
Source Transcript PGSC0003DMT400052200 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g094300.2 | +1 | 1e-130 | 392 | 201/210 (96%) | genomic_reference:SL2.50ch02 gene_region:49450155-49452911 transcript_region:SL2.50ch02:49450155..49452911+ go_terms:GO:0008152 functional_description:Uridylyltransferase PII (AHRD V1 *--- C7JBQ7_ACEP3); contains Interpro domain(s) IPR002912 Amino acid-binding ACT |
| TAIR PP10 | AT3G01990.1 | +1 | 3e-65 | 223 | 128/218 (59%) | ACT domain repeat 6 | chr3:330256-332066 FORWARD LENGTH=433 |