Probe CUST_863_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_863_PI426222305 | JHI_St_60k_v1 | DMT400001279 | ATGATAAGGCTTTGAAGCTTGAAGAGTTTGGAGTGAGTGGCTCAGATGCTGAGAGTGTAT |
All Microarray Probes Designed to Gene DMG400000486
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1251_PI426222305 | JHI_St_60k_v1 | DMT400001280 | GCAGAAGTGTTCATTTGAACTGCTTTTTCATTTACCTCTTTTTGAACATTTCCAACCTCA |
| CUST_863_PI426222305 | JHI_St_60k_v1 | DMT400001279 | ATGATAAGGCTTTGAAGCTTGAAGAGTTTGGAGTGAGTGGCTCAGATGCTGAGAGTGTAT |
| CUST_1100_PI426222305 | JHI_St_60k_v1 | DMT400001281 | CTTGGCCTGAAAATGGCTGCAATCTTACAAACATGTATTCTGTCTTTACAGTATATATCA |
Microarray Signals from CUST_863_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 871.792 | 145.907 | 1.18132 | 0.170869 |
| ABA 1h | 648.756 | 51.7493 | 1.01925 | 0.0590774 |
| ACC 1h | 640.676 | 115.77 | 0.839595 | 0.104557 |
| BABA 1h | 554.327 | 124.697 | 0.755476 | 0.120847 |
| Chitin 1h | 573.289 | 87.5621 | 0.871886 | 0.0629571 |
| Epi 1h | 490.661 | 42.4261 | 0.786917 | 0.0517753 |
| SA 1h | 726.191 | 133.9 | 0.956182 | 0.115877 |
| Me-JA 1h | 462.842 | 71.0082 | 0.773054 | 0.0601525 |
| Control 6h | 1373.15 | 382.518 | 1.74386 | 0.432049 |
| ABA 6h | 1081.6 | 231.538 | 1.34401 | 0.284203 |
| ACC 6h | 1046.91 | 266.373 | 1.19319 | 0.174114 |
| BABA 6h | 1250.99 | 252.698 | 1.49799 | 0.27919 |
| Chitin 6h | 1195.88 | 175.909 | 1.53557 | 0.222577 |
| Epi 6h | 1249 | 333.183 | 1.45123 | 0.404131 |
| SA 6h | 708.609 | 266.471 | 0.838105 | 0.310298 |
| Me-JA 6h | 899.044 | 308.055 | 1.08514 | 0.388264 |
Source Transcript PGSC0003DMT400001279 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g086710.2 | +2 | 0.0 | 885 | 473/482 (98%) | genomic_reference:SL2.50ch02 gene_region:43930486-43935980 transcript_region:SL2.50ch02:43930486..43935980+ go_terms:GO:0005524,GO:0016656 functional_description:Monodehydroascorbate reductase (NADH)-like protein (AHRD V1 **** Q0WUJ1_ARATH); contains Interpro domain(s) IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
| TAIR PP10 | AT3G27820.1 | +2 | 0.0 | 719 | 377/488 (77%) | monodehydroascorbate reductase 4 | chr3:10315249-10317881 FORWARD LENGTH=488 |