Probe CUST_5619_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5619_PI426222305 | JHI_St_60k_v1 | DMT400022972 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
All Microarray Probes Designed to Gene DMG400008894
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5619_PI426222305 | JHI_St_60k_v1 | DMT400022972 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
| CUST_5493_PI426222305 | JHI_St_60k_v1 | DMT400022969 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
| CUST_5749_PI426222305 | JHI_St_60k_v1 | DMT400022968 | GATACTGATAAGAGTTGGACAATAGGAAGCCACTAGCTTGTCAATTTGTCTATATAATGT |
| CUST_5504_PI426222305 | JHI_St_60k_v1 | DMT400022970 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
Microarray Signals from CUST_5619_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 152.281 | 19.1109 | 7.12891 | 0.448377 |
| ABA 1h | 143.75 | 12.414 | 7.6658 | 0.953496 |
| ACC 1h | 108.563 | 35.9041 | 4.24525 | 1.7662 |
| BABA 1h | 50.7486 | 16.495 | 2.2107 | 0.62835 |
| Chitin 1h | 20.1582 | 5.33026 | 0.969333 | 0.437225 |
| Epi 1h | 68.5886 | 15.1839 | 3.59711 | 0.797677 |
| SA 1h | 44.8798 | 4.13276 | 2.07377 | 0.191506 |
| Me-JA 1h | 12.0799 | 3.35362 | 0.654283 | 0.213543 |
| Control 6h | 21.2556 | 11.65 | 0.744299 | 0.440202 |
| ABA 6h | 20.5106 | 3.66415 | 0.886436 | 0.194855 |
| ACC 6h | 7.18674 | 3.90673 | 0.292256 | 0.155853 |
| BABA 6h | 21.7334 | 3.87282 | 0.906163 | 0.167933 |
| Chitin 6h | 15.2472 | 3.73118 | 0.674481 | 0.169627 |
| Epi 6h | 11.9462 | 4.22155 | 0.442145 | 0.186139 |
| SA 6h | 15.0421 | 3.61404 | 0.683952 | 0.20735 |
| Me-JA 6h | 6.3119 | 3.2696 | 0.297809 | 0.157646 |
Source Transcript PGSC0003DMT400022972 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G55580.1 | +3 | 1e-175 | 513 | 286/467 (61%) | Regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD LENGTH=488 |