Probe CUST_5493_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5493_PI426222305 | JHI_St_60k_v1 | DMT400022969 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
All Microarray Probes Designed to Gene DMG400008894
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5619_PI426222305 | JHI_St_60k_v1 | DMT400022972 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
| CUST_5493_PI426222305 | JHI_St_60k_v1 | DMT400022969 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
| CUST_5749_PI426222305 | JHI_St_60k_v1 | DMT400022968 | GATACTGATAAGAGTTGGACAATAGGAAGCCACTAGCTTGTCAATTTGTCTATATAATGT |
| CUST_5504_PI426222305 | JHI_St_60k_v1 | DMT400022970 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
Microarray Signals from CUST_5493_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 178.708 | 19.5519 | 9.56882 | 0.582217 |
| ABA 1h | 159.578 | 9.796 | 9.73416 | 0.807373 |
| ACC 1h | 105.971 | 43.4966 | 4.21006 | 2.75942 |
| BABA 1h | 51.4067 | 13.7247 | 2.63557 | 0.589576 |
| Chitin 1h | 16.5779 | 3.53222 | 0.996533 | 0.213529 |
| Epi 1h | 64.5434 | 12.529 | 3.88581 | 0.776925 |
| SA 1h | 59.9172 | 8.46022 | 3.10027 | 0.260212 |
| Me-JA 1h | 17.9864 | 3.61751 | 1.16205 | 0.245165 |
| Control 6h | 11.2864 | 3.74053 | 0.551237 | 0.222687 |
| ABA 6h | 15.9651 | 3.89324 | 0.787686 | 0.206776 |
| ACC 6h | 34.349 | 21.6004 | 0.992816 | 1.1484 |
| BABA 6h | 12.1118 | 4.11918 | 0.534759 | 0.208863 |
| Chitin 6h | 15.1146 | 4.15819 | 0.755776 | 0.218526 |
| Epi 6h | 13.886 | 4.23055 | 0.631073 | 0.230072 |
| SA 6h | 12.1465 | 5.4765 | 0.552435 | 0.371593 |
| Me-JA 6h | 10.23 | 4.14764 | 0.479439 | 0.22379 |
Source Transcript PGSC0003DMT400022969 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G55580.1 | +3 | 3e-73 | 246 | 130/227 (57%) | Regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD LENGTH=488 |