Probe CUST_5504_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5504_PI426222305 | JHI_St_60k_v1 | DMT400022970 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
All Microarray Probes Designed to Gene DMG400008894
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5619_PI426222305 | JHI_St_60k_v1 | DMT400022972 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
| CUST_5493_PI426222305 | JHI_St_60k_v1 | DMT400022969 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
| CUST_5749_PI426222305 | JHI_St_60k_v1 | DMT400022968 | GATACTGATAAGAGTTGGACAATAGGAAGCCACTAGCTTGTCAATTTGTCTATATAATGT |
| CUST_5504_PI426222305 | JHI_St_60k_v1 | DMT400022970 | GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
Microarray Signals from CUST_5504_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 157.521 | 13.0313 | 7.04795 | 0.437112 |
| ABA 1h | 159.5 | 9.84784 | 8.0982 | 0.804859 |
| ACC 1h | 107.606 | 30.9624 | 4.29279 | 1.13509 |
| BABA 1h | 59.7595 | 14.8815 | 2.60532 | 0.468698 |
| Chitin 1h | 17.9152 | 3.66441 | 0.889303 | 0.185544 |
| Epi 1h | 68.3252 | 15.773 | 3.38186 | 0.842886 |
| SA 1h | 57.5948 | 5.27813 | 2.50508 | 0.215282 |
| Me-JA 1h | 20.176 | 3.85848 | 1.10522 | 0.215463 |
| Control 6h | 9.32797 | 3.74374 | 0.400958 | 0.179289 |
| ABA 6h | 15.5324 | 5.04397 | 0.581182 | 0.283649 |
| ACC 6h | 10.5003 | 4.34219 | 0.379584 | 0.180212 |
| BABA 6h | 16.7295 | 4.23528 | 0.652344 | 0.178176 |
| Chitin 6h | 18.6386 | 4.23897 | 0.757656 | 0.190371 |
| Epi 6h | 18.2097 | 4.53346 | 0.717227 | 0.192819 |
| SA 6h | 14.1133 | 4.0462 | 0.588164 | 0.270799 |
| Me-JA 6h | 11.8561 | 5.48236 | 0.441255 | 0.21459 |
Source Transcript PGSC0003DMT400022970 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G55580.1 | +3 | 9e-177 | 515 | 279/466 (60%) | Regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD LENGTH=488 |