Probe CUST_52450_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_52450_PI426222305 | JHI_St_60k_v1 | DMT400041558 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
All Microarray Probes Designed to Gene DMG400016110
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_52448_PI426222305 | JHI_St_60k_v1 | DMT400041559 | AGATTTGAGGCTGGCCATTATGGCTTCAGAAAGATTGCTCATTCTGCAGCCACACAATTG |
| CUST_52449_PI426222305 | JHI_St_60k_v1 | DMT400041557 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
| CUST_52450_PI426222305 | JHI_St_60k_v1 | DMT400041558 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
| CUST_52447_PI426222305 | JHI_St_60k_v1 | DMT400041560 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
Microarray Signals from CUST_52450_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 47.6408 | 8.22896 | 0.73693 | 0.125054 |
| ABA 1h | 41.2594 | 14.4157 | 0.661215 | 0.184107 |
| ACC 1h | 23.7835 | 6.13714 | 0.337264 | 0.108143 |
| BABA 1h | 47.0948 | 7.82844 | 0.753751 | 0.0804211 |
| Chitin 1h | 44.4762 | 9.73512 | 0.749887 | 0.144095 |
| Epi 1h | 37.3255 | 15.4756 | 0.484527 | 0.476151 |
| SA 1h | 42.4308 | 9.90793 | 0.612711 | 0.14496 |
| Me-JA 1h | 31.7849 | 4.13507 | 0.615159 | 0.0800194 |
| Control 6h | 88.1954 | 26.1872 | 1.24906 | 0.358179 |
| ABA 6h | 256.08 | 27.9975 | 3.78262 | 0.42383 |
| ACC 6h | 93.0802 | 11.7813 | 1.2696 | 0.218287 |
| BABA 6h | 112.538 | 7.69371 | 1.59851 | 0.109408 |
| Chitin 6h | 133.553 | 45.1654 | 1.79546 | 0.54646 |
| Epi 6h | 100.744 | 10.9512 | 1.40517 | 0.151945 |
| SA 6h | 87.4187 | 12.324 | 1.37625 | 0.104487 |
| Me-JA 6h | 90.4636 | 20.9916 | 1.37121 | 0.20289 |
Source Transcript PGSC0003DMT400041558 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G19160.2 | +3 | 8e-106 | 343 | 187/341 (55%) | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:10477772-10479947 FORWARD LENGTH=453 |