Probe CUST_52448_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_52448_PI426222305 | JHI_St_60k_v1 | DMT400041559 | AGATTTGAGGCTGGCCATTATGGCTTCAGAAAGATTGCTCATTCTGCAGCCACACAATTG |
All Microarray Probes Designed to Gene DMG400016110
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_52448_PI426222305 | JHI_St_60k_v1 | DMT400041559 | AGATTTGAGGCTGGCCATTATGGCTTCAGAAAGATTGCTCATTCTGCAGCCACACAATTG |
| CUST_52449_PI426222305 | JHI_St_60k_v1 | DMT400041557 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
| CUST_52450_PI426222305 | JHI_St_60k_v1 | DMT400041558 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
| CUST_52447_PI426222305 | JHI_St_60k_v1 | DMT400041560 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
Microarray Signals from CUST_52448_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 522.433 | 52.7839 | 0.7756 | 0.0450419 |
| ABA 1h | 408.461 | 52.0172 | 0.681315 | 0.0427753 |
| ACC 1h | 409.864 | 84.6944 | 0.568347 | 0.0935643 |
| BABA 1h | 559.883 | 143.627 | 0.800113 | 0.169141 |
| Chitin 1h | 489.937 | 99.0728 | 0.787547 | 0.100309 |
| Epi 1h | 384.168 | 41.2774 | 0.658001 | 0.0696604 |
| SA 1h | 545.486 | 75.7709 | 0.780364 | 0.0679485 |
| Me-JA 1h | 320.509 | 44.0233 | 0.576971 | 0.0410089 |
| Control 6h | 1051.24 | 322.76 | 1.42625 | 0.37344 |
| ABA 6h | 1793.2 | 157.674 | 2.50999 | 0.146031 |
| ACC 6h | 880.428 | 93.4606 | 1.1389 | 0.0659507 |
| BABA 6h | 1023.89 | 169.176 | 1.33826 | 0.204751 |
| Chitin 6h | 998.897 | 57.9423 | 1.4043 | 0.0812533 |
| Epi 6h | 1052.56 | 219.537 | 1.34224 | 0.246623 |
| SA 6h | 879.707 | 269.821 | 1.19418 | 0.294898 |
| Me-JA 6h | 898.892 | 169.638 | 1.30076 | 0.162346 |
Source Transcript PGSC0003DMT400041559 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G19160.2 | +2 | 9e-140 | 420 | 231/363 (64%) | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:10477772-10479947 FORWARD LENGTH=453 |