Probe CUST_52449_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_52449_PI426222305 | JHI_St_60k_v1 | DMT400041557 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
All Microarray Probes Designed to Gene DMG400016110
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_52448_PI426222305 | JHI_St_60k_v1 | DMT400041559 | AGATTTGAGGCTGGCCATTATGGCTTCAGAAAGATTGCTCATTCTGCAGCCACACAATTG |
| CUST_52449_PI426222305 | JHI_St_60k_v1 | DMT400041557 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
| CUST_52450_PI426222305 | JHI_St_60k_v1 | DMT400041558 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
| CUST_52447_PI426222305 | JHI_St_60k_v1 | DMT400041560 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
Microarray Signals from CUST_52449_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 41.1399 | 4.58247 | 0.650323 | 0.0673835 |
| ABA 1h | 36.1147 | 9.52672 | 0.608486 | 0.123069 |
| ACC 1h | 27.1529 | 6.29757 | 0.400179 | 0.0703614 |
| BABA 1h | 43.3866 | 8.20735 | 0.689658 | 0.077563 |
| Chitin 1h | 54.2597 | 7.14872 | 0.947968 | 0.0842096 |
| Epi 1h | 27.6374 | 4.79718 | 0.493842 | 0.0843853 |
| SA 1h | 52.7718 | 6.48482 | 0.808184 | 0.0719339 |
| Me-JA 1h | 27.7669 | 5.08235 | 0.52283 | 0.079211 |
| Control 6h | 84.1846 | 23.5704 | 1.22552 | 0.299142 |
| ABA 6h | 255.601 | 24.0156 | 3.80888 | 0.44828 |
| ACC 6h | 92.3961 | 13.5382 | 1.2588 | 0.10575 |
| BABA 6h | 112.572 | 8.73867 | 1.5989 | 0.108589 |
| Chitin 6h | 88.8007 | 6.45663 | 1.3309 | 0.0967883 |
| Epi 6h | 102.817 | 11.9702 | 1.4398 | 0.169494 |
| SA 6h | 79.0076 | 12.9227 | 1.23848 | 0.0976015 |
| Me-JA 6h | 92.3823 | 20.112 | 1.417 | 0.18905 |
Source Transcript PGSC0003DMT400041557 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G19160.2 | +1 | 8e-53 | 194 | 110/227 (48%) | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:10477772-10479947 FORWARD LENGTH=453 |