Probe CUST_43170_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_43170_PI426222305 | JHI_St_60k_v1 | DMT400042668 | GCCTTGAAAAATCGTCGTATTGCTGATATAATGTCTCTTAGTTGAAGTGAAGTTTTGTGA |
All Microarray Probes Designed to Gene DMG400016551
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_43181_PI426222305 | JHI_St_60k_v1 | DMT400042669 | CAGTGATGATCTCCAATTCCATCAAACCCACCCATCAACTACAAGAAGAAGCATTTTCAG |
| CUST_43199_PI426222305 | JHI_St_60k_v1 | DMT400042667 | AATAGCAAATCAAATACAGTTCACTCAGCCCACAGTGATGATCTCCAATTCCATCAAACC |
| CUST_43170_PI426222305 | JHI_St_60k_v1 | DMT400042668 | GCCTTGAAAAATCGTCGTATTGCTGATATAATGTCTCTTAGTTGAAGTGAAGTTTTGTGA |
Microarray Signals from CUST_43170_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 255.111 | 56.2867 | 1.51881 | 0.266177 |
| ABA 1h | 76.8536 | 8.17521 | 0.539751 | 0.0402208 |
| ACC 1h | 126.166 | 8.44665 | 0.771518 | 0.0609006 |
| BABA 1h | 148.045 | 34.8747 | 0.900149 | 0.158754 |
| Chitin 1h | 143.052 | 9.05372 | 0.996471 | 0.0629136 |
| Epi 1h | 123.048 | 12.3049 | 0.883322 | 0.0834282 |
| SA 1h | 165.859 | 23.6819 | 0.994987 | 0.152 |
| Me-JA 1h | 52.4729 | 7.86272 | 0.394583 | 0.0372569 |
| Control 6h | 194.208 | 45.3316 | 1.15216 | 0.205167 |
| ABA 6h | 33.3798 | 9.37142 | 0.176902 | 0.059474 |
| ACC 6h | 216.68 | 20.4298 | 1.17628 | 0.0722703 |
| BABA 6h | 264.455 | 52.3777 | 1.41863 | 0.270885 |
| Chitin 6h | 215.764 | 19.3316 | 1.26221 | 0.130289 |
| Epi 6h | 240.207 | 47.068 | 1.29082 | 0.279056 |
| SA 6h | 151.701 | 62.8724 | 0.822528 | 0.284781 |
| Me-JA 6h | 228.568 | 49.0673 | 1.36819 | 0.252129 |
Source Transcript PGSC0003DMT400042668 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G09960.1 | +3 | 5e-26 | 105 | 62/103 (60%) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:3106503-3107658 FORWARD LENGTH=112 |