Probe CUST_33482_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_33482_PI426222305 | JHI_St_60k_v1 | DMT400045409 | CACAACCCACTGTATGTATGTTCTTTATATGTATCATCAGTATACACTAAATCAAGGACC |
All Microarray Probes Designed to Gene DMG400017619
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_33497_PI426222305 | JHI_St_60k_v1 | DMT400045410 | TTTCTATCTATGAGGTAGAGGTAGGAGGTAAGGTCTGCGTATACTCTACCTTTACCAGGC |
| CUST_33482_PI426222305 | JHI_St_60k_v1 | DMT400045409 | CACAACCCACTGTATGTATGTTCTTTATATGTATCATCAGTATACACTAAATCAAGGACC |
| CUST_33570_PI426222305 | JHI_St_60k_v1 | DMT400045411 | CACAACCCACTGTATGTATGTTCTTTATATGTATCATCAGTATACACTAAATCAAGGACC |
Microarray Signals from CUST_33482_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 36.6781 | 4.18623 | 1.09696 | 0.113641 |
| ABA 1h | 84.0935 | 15.7563 | 2.79156 | 0.522705 |
| ACC 1h | 21.8911 | 4.3252 | 0.616842 | 0.116347 |
| BABA 1h | 34.0623 | 9.34023 | 0.980357 | 0.215097 |
| Chitin 1h | 28.0436 | 3.56682 | 0.94518 | 0.119585 |
| Epi 1h | 21.2202 | 3.29697 | 0.739347 | 0.11657 |
| SA 1h | 33.9963 | 3.63172 | 0.993318 | 0.10808 |
| Me-JA 1h | 22.0803 | 4.61628 | 0.787077 | 0.129376 |
| Control 6h | 43.0604 | 9.92099 | 1.23712 | 0.218194 |
| ABA 6h | 87.4308 | 14.5264 | 2.43192 | 0.263257 |
| ACC 6h | 26.0348 | 4.13415 | 0.678847 | 0.105949 |
| BABA 6h | 33.8469 | 10.6129 | 0.837965 | 0.228052 |
| Chitin 6h | 41.2023 | 4.19609 | 1.17249 | 0.119661 |
| Epi 6h | 29.0138 | 5.50145 | 0.75369 | 0.172605 |
| SA 6h | 25.6862 | 4.52529 | 0.76079 | 0.199668 |
| Me-JA 6h | 36.5801 | 8.07781 | 1.05337 | 0.173038 |
Source Transcript PGSC0003DMT400045409 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G02590.1 | +2 | 2e-91 | 288 | 167/214 (78%) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative small multi-drug export (InterPro:IPR009577); Has 405 Blast hits to 405 proteins in 185 species: Archae - 65; Bacteria - 295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | chr2:704977-706494 FORWARD LENGTH=324 |